Factsheet for TraesCS7B01G103900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G200000.1	Wheat	cytosol	82.2	88.5
TraesCS7A01G197500.1	Wheat	extracellular	42.43	78.14
EES17528	Sorghum	extracellular	60.24	59.88
TraesCS3B01G498900.1	Wheat	extracellular	59.35	58.82
TraesCS1B01G017300.1	Wheat	extracellular	52.52	52.52
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	47.77	47.08
TraesCS2B01G493300.1	Wheat	extracellular	47.18	46.09
Bra005918.1-P	Field mustard	extracellular	25.82	42.44
CDX70058	Canola	extracellular	41.84	42.22
KRG95348	Soybean	mitochondrion	43.92	42.17
Bra009236.1-P	Field mustard	extracellular	41.54	41.92
GSMUA_Achr9P12430_001	Banana	extracellular	37.39	41.72
CDX70057	Canola	extracellular	41.54	41.67
Bra009237.1-P	Field mustard	extracellular	41.54	41.67
CDX98967	Canola	extracellular	41.25	41.37
CDX98966	Canola	extracellular	40.36	40.72
CDX70059	Canola	extracellular	40.06	40.42
AT5G06860.1	Thale cress	extracellular	39.47	40.3
Bra009234.1-P	Field mustard	extracellular	39.47	40.18
Bra009235.1-P	Field mustard	extracellular	39.76	40.12
CDX70060	Canola	extracellular	39.47	40.06
CDX98965	Canola	extracellular	39.17	39.76
VIT_13s0064g01370.t01	Wine grape	extracellular	39.17	39.76
AT5G06870.1	Thale cress	extracellular	38.87	39.7
CDX81023	Canola	extracellular	40.06	39.47
Bra009238.1-P	Field mustard	extracellular	38.58	39.16
Solyc09g014480.1.1	Tomato	extracellular	38.87	39.1
CDY58887	Canola	extracellular	38.28	39.09
Solyc09g014590.2.1	Tomato	extracellular	35.91	38.78
CDY58884	Canola	extracellular	37.98	38.67
CDY58888	Canola	extracellular	39.17	38.6
Bra005917.1-P	Field mustard	extracellular	39.17	38.6
KRH12977	Soybean	nucleus	38.58	38.35
PGSC0003DMT400021883	Potato	extracellular	37.98	38.32
TraesCS2B01G226900.1	Wheat	extracellular	37.98	38.32
TraesCS2B01G353300.1	Wheat	extracellular	36.8	37.8
Bra005919.1-P	Field mustard	extracellular	37.09	37.76
Bra005916.1-P	Field mustard	extracellular	38.58	37.46
CDY58889	Canola	extracellular	37.98	36.89
KRH12976	Soybean	cytosol	40.06	36.29
TraesCS5B01G265900.1	Wheat	extracellular	37.98	36.26
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	37.98	33.25
TraesCS7B01G094700.1	Wheat	plastid	33.23	32.37
CDX70056	Canola	extracellular	38.58	32.1
TraesCS7B01G146800.1	Wheat	extracellular	32.94	29.21
TraesCS2B01G590900.1	Wheat	extracellular	32.64	24.61
CDX81022	Canola	extracellular, plasma membrane	33.83	22.53

Protein Annotations

EnsemblPlants:TraesCS7B01G103900.1	EnsemblPlantsGene:TraesCS7B01G103900	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:119246939..119247952

Molecular Weight (calculated)

36025.3 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.217

Length

337 amino acids

Sequence
(BLAST)

001: MSTPPSAHAF LVLLLLVLAG AVIASAENNK DCHPSDKAAL LAVKSAFGNQ SHFASWTPST PCCDWHDITC NDAGRVIILL FFEDVNLTGT IPDAISGLTE
101: LLVLNLYYLP AISGPIPKGI AKLSKLTSLS ISLTSVSGPI PSFLGALTKL NDLTLSSNSL TGTIPASLAG LRYLDTIDLR NNRLTGTIPP LFYNSKSPII
201: SYLLLSNNHL SGSIPTEFAA VGFQFIDLSH NALTGDASVF FGRTKELESI NLSHNALSFD LSSVEFPEEM QAMDASYNAI RGGIPAQVAN VTNLRQFNVS
301: YNKLCGQVPA ALARLDVYNF QHNKCLCGAP LPDPCKK

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.