Factsheet for Bra009234.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70060	Canola	extracellular	99.4	99.1
AT5G06860.1	Thale cress	extracellular	82.48	82.73
Bra009235.1-P	Field mustard	extracellular	77.95	77.25
Bra009236.1-P	Field mustard	extracellular	76.74	76.05
Bra009237.1-P	Field mustard	extracellular	76.74	75.6
Bra009238.1-P	Field mustard	extracellular	72.21	71.99
Bra005918.1-P	Field mustard	extracellular	43.5	70.24
Bra005919.1-P	Field mustard	extracellular	68.58	68.58
Bra005916.1-P	Field mustard	extracellular	71.0	67.72
Bra005917.1-P	Field mustard	extracellular	68.58	66.37
Solyc07g065090.1.1	Tomato	extracellular	59.52	60.24
VIT_08s0007g07690.t01	Wine grape	extracellular	62.24	59.88
PGSC0003DMT400057136	Potato	extracellular	59.21	59.76
KRG95348	Soybean	mitochondrion	61.93	58.4
KRH12977	Soybean	nucleus	55.59	54.28
Bra038700.1-P	Field mustard	extracellular, vacuole	52.27	53.23
TraesCS3A01G459300.1	Wheat	cytosol	23.57	52.7
Bra034774.1-P	Field mustard	extracellular	48.64	49.39
Bra034773.1-P	Field mustard	cytosol	46.83	49.21
KRH12976	Soybean	cytosol	54.98	48.92
TraesCS3A01G459200.1	Wheat	extracellular	48.94	47.65
TraesCS3D01G451800.1	Wheat	extracellular	48.64	47.35
TraesCS3B01G498900.1	Wheat	extracellular	48.04	46.76
TraesCS3D01G451900.1	Wheat	extracellular	47.13	46.02
TraesCS3D01G451400.1	Wheat	extracellular	46.83	45.72
TraesCS3A01G459000.1	Wheat	extracellular	46.83	45.45
Os05t0104200-01	Rice	extracellular	42.3	45.31
Zm00001d035753_P001	Maize	extracellular	46.53	45.16
EES17528	Sorghum	extracellular	46.22	45.13
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	48.64	45.1
EES17529	Sorghum	extracellular	45.92	44.57
GSMUA_Achr9P12430_001	Banana	extracellular	40.48	44.37
TraesCS3D01G451500.1	Wheat	extracellular	44.41	44.01
TraesCS1A01G012600.1	Wheat	extracellular	44.41	43.75
HORVU3Hr1G098610.1	Barley	extracellular	44.41	43.75
TraesCS1D01G010800.1	Wheat	extracellular	44.41	43.62
TraesCS7D01G200000.1	Wheat	cytosol	41.09	43.45
TraesCS1B01G017300.1	Wheat	extracellular	44.11	43.32
Zm00001d035756_P001	Maize	vacuole	45.32	42.86
Os05t0104150-01	Rice	extracellular	42.9	41.52
Os05t0104600-01	Rice	extracellular	41.99	41.0
TraesCS2A01G470500.1	Wheat	extracellular	41.09	39.77
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	40.79	39.47
TraesCS7B01G103900.1	Wheat	extracellular	40.18	39.47
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	43.81	39.4
TraesCS2D01G470400.1	Wheat	extracellular	40.48	39.18
TraesCS2B01G493300.1	Wheat	extracellular	40.18	38.55
HORVU2Hr1G106620.1	Barley	extracellular	39.58	38.53
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	39.88	38.48
TraesCS2A01G470600.1	Wheat	extracellular	39.27	38.46
EES17527	Sorghum	extracellular, plastid	44.71	37.66
Os05t0104700-01	Rice	extracellular	43.2	35.66
TraesCS7A01G197500.1	Wheat	extracellular	17.52	31.69
Bra023383.1-P	Field mustard	extracellular	29.91	28.53
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	31.72	28.23
Bra035741.1-P	Field mustard	extracellular	31.12	28.22
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	31.72	28.15
Bra008869.1-P	Field mustard	extracellular, plasma membrane	30.21	26.74
Bra023925.1-P	Field mustard	extracellular	29.91	26.33
Bra008870.1-P	Field mustard	extracellular	29.61	26.27
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	31.72	21.92
Bra010209.1-P	Field mustard	extracellular	31.12	21.55
Bra009680.1-P	Field mustard	extracellular, vacuole	35.35	19.93
Bra026499.1-P	Field mustard	plastid	27.19	18.18
Bra016239.1-P	Field mustard	cytosol	12.69	16.28

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	ProteinID:ACN89391	ProteinID:ACN89391.1	EnsemblPlantsGene:Bra009234	EnsemblPlants:Bra009234.1
EnsemblPlants:Bra009234.1-P	EMBL:FJ771027	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4CYD7	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44138	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI00017A4499
SEG:seg	:	:	:	:	:

Description

AT5G06860 (E=8e-146) PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding

Coordinates

chrA10:+:15762018..15763085

Molecular Weight (calculated)

37034.6 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.073

Length

331 amino acids

Sequence
(BLAST)

001: MDKTTTLLLF FFLFTFLTTS FSKNLCNQDD KTTLLKIKKA LNNPYHLASW DPRTDCCSWY CLECGDATVN HRVTALTIFS GQISGQIPPE VGDLSYLQTL
101: VFRKLTNLTG QIPRTIAKLK YLRSLRLSWT NLTGPVPGFL SELKNLQWVD LSFNDLSGSI PSSLSLLPNL VSLDLSRNKL TGSIPESFGS FPAKVPDLYL
201: SHNQLSGYIP KTLGNLDFSK IDFSRNKLGG EASMLFGANK TTWYIDLSRN MLQFDLSRVV IPKTLGILDL NHNGITGNIP VQWTEAPLQF FNVSYNRLCG
301: HIPTGGTLQE FDTYSYFHNK CLCGAPLDSC K

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.