Factsheet for Bra009680.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88024	Canola	extracellular, vacuole	99.83	99.83
Bra026499.1-P	Field mustard	plastid	73.59	87.27
AT5G23400.1	Thale cress	vacuole	82.96	82.68
KRH36172	Soybean	nucleus	59.97	58.76
VIT_10s0071g00860.t01	Wine grape	extracellular, vacuole	58.94	58.54
KRG90583	Soybean	extracellular	54.51	57.87
PGSC0003DMT400065091	Potato	extracellular	57.41	56.83
Solyc04g008830.1.1	Tomato	nucleus	57.07	56.49
GSMUA_Achr1P06920_001	Banana	plastid	19.42	50.67
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	37.99	49.89
TraesCS2D01G561100.1	Wheat	extracellular	36.97	48.98
Os04t0677200-01	Rice	cytosol, peroxisome	36.46	48.97
TraesCS2B01G590900.1	Wheat	extracellular	37.14	48.77
Zm00001d026617_P001	Maize	extracellular	40.55	46.12
KXG27431	Sorghum	vacuole	41.06	45.99
HORVU2Hr1G119550.1	Barley	cytosol	24.02	40.17
Bra005918.1-P	Field mustard	extracellular	13.29	38.05
Bra035741.1-P	Field mustard	extracellular	23.34	37.53
Bra023383.1-P	Field mustard	extracellular	21.98	37.18
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	23.17	36.56
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	23.17	36.46
Bra008869.1-P	Field mustard	extracellular, plasma membrane	23.0	36.1
Bra008870.1-P	Field mustard	extracellular	22.83	35.92
Bra009237.1-P	Field mustard	extracellular	20.27	35.42
Bra009234.1-P	Field mustard	extracellular	19.93	35.35
Bra009236.1-P	Field mustard	extracellular	20.1	35.33
Bra023925.1-P	Field mustard	extracellular	22.32	34.84
Bra005917.1-P	Field mustard	extracellular	20.27	34.8
Bra009235.1-P	Field mustard	extracellular	19.76	34.73
Bra005919.1-P	Field mustard	extracellular	19.42	34.44
Bra016239.1-P	Field mustard	cytosol	14.82	33.72
Bra010209.1-P	Field mustard	extracellular	27.43	33.68
Bra034774.1-P	Field mustard	extracellular	18.57	33.44
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	27.26	33.4
Bra038700.1-P	Field mustard	extracellular, vacuole	18.23	32.92
Bra005916.1-P	Field mustard	extracellular	19.42	32.85
Bra009238.1-P	Field mustard	extracellular	18.4	32.53
Bra034773.1-P	Field mustard	cytosol	17.38	32.38

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra009680	EnsemblPlants:Bra009680.1	EnsemblPlants:Bra009680.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4CZN3	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR45271
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI000253F090	SEG:seg

Description

AT5G23400 (E=1e-254) | disease resistance family protein / LRR family protein

Coordinates

chrA06:+:16513759..16515522

Molecular Weight (calculated)

63382.8 Da

IEP (calculated)

9.134

GRAVY (calculated)

0.078

Length

587 amino acids

Sequence
(BLAST)

001: MQNLRWVLNL LFVSSLLHNL VHSSSQVICS SQDRAALLAF KSSIVEDTTG VLSSWVGQDC CNGDWEGVLC NPATGKVTSL VLQSSLTEPT LYMKGTLSPS
101: LGSLGSLQVL VISGNKFITG SIPNSFSNLT SLTQLALEDN SLRGSVPTGL GHLPMLESLS FAGNRFSGVV PASLGSLRSL TTMSLARNSL SGPVPVAFKN
201: LLKLQILDLS FNLLSGPIPD FIGQFRDLTT LHLSSNRLSG GIPVSVYNLG KLQDMSLERN DLTGPLSDRI SNLKSLSILD LSSNKFVGHI PASITRLQNL
301: WSLNLSRNHF SDPLPVVVGR GFPSLLSIDL SYNNLNLGEV PSWIRDKPLT EINLAGCKLR GDFPKLTRPH DVTSLDLSDN FLTGDVSALL TNMSSLQKLK
401: LSKNQLKFDL SELKLPEGVS SVDLSSNLVT GSLSSLLNNK TSRFLEEVHL TNNQISGRIP DFAESSNLKV LNIGSNKIGG QIPSSISNLV ELVRLDISRN
501: HITGVIPQAL GQLAQLNWLD LSINALTGRI PDSLLNIKAV KHASFRANKL CGLIPQGRPF NIFPAAAYLH NLCLCGKPLP PCRKTEK

Best Arabidopsis Sequence Match ( AT5G23400.1 )
(BLAST)

001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK

Arabidopsis Description

Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.