Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88024 | Canola | extracellular, vacuole | 82.85 | 83.13 |
| CDY16850 | Canola | plastid | 69.78 | 83.03 |
| Bra026499.1-P | Field mustard | plastid | 69.78 | 83.03 |
| Bra009680.1-P | Field mustard | extracellular, vacuole | 82.68 | 82.96 |
| CDX80361 | Canola | extracellular, vacuole | 82.51 | 82.79 |
| CDY64876 | Canola | extracellular, vacuole | 80.65 | 81.48 |
| VIT_10s0071g00860.t01 | Wine grape | extracellular, vacuole | 58.74 | 58.54 |
| KRH36172 | Soybean | nucleus | 59.25 | 58.26 |
| KRG90583 | Soybean | extracellular | 54.5 | 58.05 |
| PGSC0003DMT400065091 | Potato | extracellular | 57.05 | 56.66 |
| Solyc04g008830.1.1 | Tomato | nucleus | 56.54 | 56.16 |
| GSMUA_Achr1P06920_001 | Banana | plastid | 20.2 | 52.89 |
| TraesCS2A01G593600.1 | Wheat | endoplasmic reticulum, extracellular | 36.84 | 48.55 |
| TraesCS2D01G561100.1 | Wheat | extracellular | 36.16 | 48.08 |
| TraesCS2B01G590900.1 | Wheat | extracellular | 36.33 | 47.87 |
| Os04t0677200-01 | Rice | cytosol, peroxisome | 35.48 | 47.83 |
| KXG27431 | Sorghum | vacuole | 41.26 | 46.37 |
| Zm00001d026617_P001 | Maize | extracellular | 40.58 | 46.32 |
| HORVU2Hr1G119550.1 | Barley | cytosol | 23.26 | 39.03 |
| AT5G12940.1 | Thale cress | extracellular | 23.94 | 38.01 |
| AT3G20820.1 | Thale cress | extracellular | 23.43 | 37.81 |
| AT3G12610.1 | Thale cress | extracellular | 22.75 | 36.02 |
| AT2G26380.1 | Thale cress | endoplasmic reticulum, extracellular | 29.03 | 35.62 |
| AT1G33612.1 | Thale cress | extracellular | 27.5 | 35.6 |
| AT1G33600.1 | Thale cress | extracellular | 28.69 | 35.36 |
| AT1G33670.1 | Thale cress | extracellular | 27.16 | 35.16 |
| AT3G12145.1 | Thale cress | extracellular | 18.85 | 34.15 |
| AT1G33610.1 | Thale cress | extracellular, plasma membrane, vacuole | 27.67 | 34.1 |
| AT5G06860.1 | Thale cress | extracellular | 18.68 | 33.33 |
| AT1G33590.2 | Thale cress | plastid | 29.03 | 33.27 |
| AT5G06870.1 | Thale cress | extracellular | 18.0 | 32.12 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:832405 | UniProt:A0A178UCM8 | ProteinID:AED93160.1 | ArrayExpress:AT5G23400 |
| EnsemblPlantsGene:AT5G23400 | RefSeq:AT5G23400 | TAIR:AT5G23400 | RefSeq:AT5G23400-TAIR-G | EnsemblPlants:AT5G23400.1 | TAIR:AT5G23400.1 |
| EMBL:AY093083 | Unigene:At.7017 | ProteinID:BAB09556.1 | EMBL:BT003360 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0009506 | GO:GO:0030312 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| RefSeq:NP_197731.1 | ProteinID:OAO90917.1 | PFAM:PF08263 | PFAM:PF13855 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR45271 | UniProt:Q9FHL8 | SMART:SM00365 | SMART:SM00369 |
| SUPFAM:SSF52058 | SignalP:SignalP-noTM | UniParc:UPI000000BFD2 | SEG:seg | : | : |
Description
Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
Coordinates
chr5:+:7880272..7882634
Molecular Weight (calculated)
64021.9 Da
IEP (calculated)
10.207
GRAVY (calculated)
0.079
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.