Factsheet for AT1G33590.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 1
plasma membrane 2
extracellular 2
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93758	Canola	plastid	43.77	87.55
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	79.18	84.97
CDY40923	Canola	extracellular, vacuole	76.65	84.01
CDY15279	Canola	plastid	68.29	82.39
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	24.9	78.53
AT1G33600.1	Thale cress	extracellular	68.29	73.43
AT2G26380.1	Thale cress	endoplasmic reticulum, extracellular	68.48	73.33
AT1G33612.1	Thale cress	extracellular	62.45	70.55
AT1G33610.1	Thale cress	extracellular, plasma membrane, vacuole	65.18	70.08
AT1G33670.1	Thale cress	extracellular	61.09	69.01
PGSC0003DMT400043544	Potato	extracellular	59.34	63.81
KRH56366	Soybean	nucleus	59.14	62.17
Solyc10g052880.1.1	Tomato	extracellular	57.0	61.3
VIT_18s0089g00010.t01	Wine grape	plasma membrane	63.62	34.24
AT3G12145.1	Thale cress	extracellular	21.4	33.85
AT5G12940.1	Thale cress	extracellular	24.12	33.42
AT5G06860.1	Thale cress	extracellular	20.62	32.12
AT5G06870.1	Thale cress	extracellular	20.43	31.82
AT3G20820.1	Thale cress	extracellular	22.18	31.23
AT3G12610.1	Thale cress	extracellular	21.6	29.84
AT5G23400.1	Thale cress	vacuole	33.27	29.03

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:840253	UniProt:A0A1P8AWX3	ProteinID:AAG26075.1	ProteinID:ANM61168.1
ProteinID:ANM61169.1	ArrayExpress:AT1G33590	EnsemblPlantsGene:AT1G33590	RefSeq:AT1G33590	TAIR:AT1G33590	RefSeq:AT1G33590-TAIR-G
EnsemblPlants:AT1G33590.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	RefSeq:NP_001323401.1	RefSeq:NP_564426.2
PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR45271	SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix
UniParc:UPI000848AF81	SEG:seg	:	:	:	:

Description

Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]

Coordinates

chr1:+:12177673..12179628

Molecular Weight (calculated)

55840.6 Da

IEP (calculated)

9.230

GRAVY (calculated)

0.115

Length

514 amino acids

Sequence
(BLAST)

001: MQMDWSKTST LTSQLSSNLF PTTNSSLLSI NTTQFTTMNS SFTLFIFTFV IFLQCLNPTG AATCHPDDEA GLLAFKAGIT RDPSGILSSW KKGTACCSWN
101: GVTCLTTDRV SALSVAGQAD VAGSFLSGTL SPSLAKLKHL DGIYFTDLKN ITGSFPQFLF QLPNLKYVYI ENNRLSGTLP ANIGALSQLE AFSLEGNRFT
201: GPIPSSISNL TLLTQLKLGN NLLTGTIPLG VANLKLMSYL NLGGNRLTGT IPDIFKSMPE LRSLTLSRNG FSGNLPPSIA SLAPILRFLE LGHNKLSGTI
301: PNFLSNFKAL DTLDLSKNRF SGVIPKSFAN LTKIFNLDLS HNLLTDPFPV LNVKGIESLD LSYNQFHLNT IPKWVTSSPI IFSLKLAKCG IKMSLDDWKP
401: AQTFYYDFID LSENEITGSP ARFLNQTEYL VEFKAAGNKL RFDMGKLTFA KTLTTLDISR NLVFGKVPAM VAGLKTLNVS HNHLCGKLPV TKFPASAFVG
501: NDCLCGSPLS PCKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.