Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • peroxisome 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15279 Canola plastid 96.89 58.45
Bra028006.1-P Field mustard endoplasmic reticulum, vacuole 98.05 52.61
CDY40923 Canola extracellular, vacuole 95.72 52.45
AT1G33590.2 Thale cress plastid 87.55 43.77
CDY38783 Canola extracellular 64.2 40.24
CDY11623 Canola extracellular 65.37 40.19
PGSC0003DMT400043544 Potato extracellular 70.04 37.66
Solyc10g052880.1.1 Tomato extracellular 68.87 37.03
KRH56366 Soybean nucleus 70.43 37.01
VIT_18s0089g00010.t01 Wine grape plasma membrane 69.65 18.74
CDY16850 Canola plastid 35.02 18.18
CDY08451 Canola endoplasmic reticulum, extracellular 19.84 15.64
CDY64876 Canola extracellular, vacuole 35.02 15.44
CDY52623 Canola extracellular, vacuole 19.46 15.38
CDY50569 Canola extracellular, vacuole 19.46 15.38
CDY42127 Canola extracellular 19.07 15.03
CDY05006 Canola extracellular 18.68 14.81
CDX80361 Canola extracellular, vacuole 33.46 14.65
CDY42131 Canola extracellular 18.29 14.55
CDX85681 Canola extracellular 19.46 14.49
CDX88024 Canola extracellular, vacuole 33.07 14.48
CDY53975 Canola extracellular 21.01 14.48
CDX91155 Canola extracellular 19.46 14.45
CDY69275 Canola extracellular 21.01 14.44
CDY42130 Canola extracellular 18.29 14.37
CDY06385 Canola extracellular 20.23 14.25
CDY19601 Canola extracellular 20.23 14.25
CDY60388 Canola extracellular 20.23 14.25
CDY08450 Canola extracellular 17.9 14.24
CDY42129 Canola cytosol 17.9 14.2
CDY08448 Canola extracellular 17.9 14.07
CDY27559 Canola extracellular 19.84 13.97
CDY58887 Canola extracellular 17.9 13.94
CDY58884 Canola extracellular 17.9 13.9
CDY14065 Canola extracellular 17.51 13.89
CDX70058 Canola extracellular 17.9 13.77
CDX70057 Canola extracellular 17.9 13.69
CDY68308 Canola extracellular 19.84 13.64
CDY58889 Canola extracellular 18.29 13.54
CDX98966 Canola extracellular 17.51 13.47
CDY58888 Canola extracellular 17.9 13.45
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 19.46 13.44
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 19.46 13.44
CDY52664 Canola extracellular 19.46 13.4
CDX98967 Canola extracellular 17.51 13.39
CDY69775 Canola extracellular, plasma membrane 19.46 13.26
CDY50534 Canola extracellular, vacuole 19.07 13.14
CDX98965 Canola extracellular 16.73 12.95
CDX70060 Canola extracellular 16.73 12.95
CDX70059 Canola extracellular 16.73 12.87
CDX81023 Canola extracellular 17.12 12.87
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 18.68 12.47
CDX70056 Canola extracellular 18.68 11.85
CDX81022 Canola extracellular, plasma membrane 14.4 7.31
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 1.17 1.84
Protein Annotations
EnsemblPlants:CDX93758EnsemblPlantsGene:GSBRNA2T00156491001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR45271PFAM:PF13855
ProteinID:CDX93758ProteinID:CDX93758.1SEG:segSUPFAM:SSF52058UniParc:UPI0004EF27ECMapMan:35.1
Description
BnaA09g23580D
Coordinates
chrLK031877:-:494469..495419
Molecular Weight (calculated)
28575.9 Da
IEP (calculated)
9.905
GRAVY (calculated)
-0.030
Length
257 amino acids
Sequence
(BLAST)
001: MPELRSLVLS RNGFSGNLPP SIPSLAPILR FLEVGRNKLS GKIPEYLSRF KALDTLDLSR NKFSGAVPKS FANLTKIFNL DLSHNLLTDP FPALYVKGIE
101: SLDLSYNKFH LKTIPKWVTS SPIIFSLKLA KCGIKMSLDD WKPAEYYFYD FIDLSENEIS GSPARFLNQT EYLVEFRAAG NKLRFDMGKL TFAKTLKTLD
201: LSRNLVFGKV PATVAGLQTL NVSQNHLCGK LPTTKFPASA FAGNDCLCGP PLFPCKV
Best Arabidopsis Sequence Match ( AT1G33590.3 )
(BLAST)
001: MDWSKTSTLT SQLSSNLFPT TNSSLLSINT TQFTTMNSSF TLFIFTFVIF LQCLNPTGAA TCHPDDEAGL LAFKAGITRD PSGILSSWKK GTACCSWNGV
101: TCLTTDRVSA LSVAGQADVA GSFLSGTLSP SLAKLKHLDG IYFTDLKNIT GSFPQFLFQL PNLKYVYIEN NRLSGTLPAN IGALSQLEAF SLEGNRFTGP
201: IPSSISNLTL LTQLKLGNNL LTGTIPLGVA NLKLMSYLNL GGNRLTGTIP DIFKSMPELR SLTLSRNGFS GNLPPSIASL APILRFLELG HNKLSGTIPN
301: FLSNFKALDT LDLSKNRFSG VIPKSFANLT KIFNLDLSHN LLTDPFPVLN VKGIESLDLS YNQFHLNTIP KWVTSSPIIF SLKLAKCGIK MSLDDWKPAQ
401: TFYYDFIDLS ENEITGSPAR FLNQTEYLVE FKAAGNKLRF DMGKLTFAKT LTTLDISRNL VFGKVPAMVA GLKTLNVSHN HLCGKLPVTK FPASAFVGND
501: CLCGSPLSPC KA
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.