Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023383.1-P | Field mustard | extracellular | 98.55 | 97.98 |
| CDX91155 | Canola | extracellular | 94.78 | 94.51 |
| CDY68308 | Canola | extracellular | 79.42 | 73.26 |
| CDY69775 | Canola | extracellular, plasma membrane | 79.13 | 72.41 |
| CDY53975 | Canola | extracellular | 77.1 | 71.31 |
| CDY69275 | Canola | extracellular | 77.1 | 71.12 |
| AT5G12940.1 | Thale cress | extracellular | 75.94 | 70.62 |
| CDY19601 | Canola | extracellular | 64.35 | 60.82 |
| CDY60388 | Canola | extracellular | 64.35 | 60.82 |
| CDY06385 | Canola | extracellular | 64.06 | 60.55 |
| CDY27559 | Canola | extracellular | 63.48 | 60.0 |
| KRH23157 | Soybean | nucleus | 62.61 | 58.7 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 45.51 | 57.09 |
| GSMUA_Achr10P... | Banana | cytosol | 45.51 | 57.09 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 60.0 | 56.87 |
| Solyc11g056680.1.1 | Tomato | extracellular | 59.71 | 56.59 |
| PGSC0003DMT400003166 | Potato | extracellular, vacuole | 59.42 | 56.32 |
| KRH24680 | Soybean | extracellular | 55.65 | 52.6 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 55.07 | 51.08 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 54.2 | 50.27 |
| CDY52664 | Canola | extracellular | 53.91 | 49.87 |
| KRH29680 | Soybean | endoplasmic reticulum | 55.65 | 49.61 |
| Os08t0505900-01 | Rice | extracellular | 54.49 | 49.47 |
| CDY50534 | Canola | extracellular, vacuole | 53.33 | 49.33 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 54.2 | 49.21 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 54.2 | 49.21 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 53.91 | 48.95 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 54.2 | 48.2 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 51.88 | 48.12 |
| HORVU7Hr1G050140.1 | Barley | plastid | 54.2 | 47.95 |
| Zm00001d031434_P001 | Maize | extracellular | 52.46 | 47.51 |
| KRH24681 | Soybean | extracellular | 48.12 | 46.76 |
| EES14271 | Sorghum | cytosol | 53.62 | 46.13 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 31.59 | 33.44 |
| CDY42127 | Canola | extracellular | 31.01 | 32.82 |
| CDY08448 | Canola | extracellular | 30.43 | 32.11 |
| CDY42130 | Canola | extracellular | 29.86 | 31.5 |
| CDY42131 | Canola | extracellular | 29.28 | 31.27 |
| CDX70057 | Canola | extracellular | 30.43 | 31.25 |
| CDY42129 | Canola | cytosol | 28.99 | 30.86 |
| CDY52623 | Canola | extracellular, vacuole | 28.99 | 30.77 |
| CDX98967 | Canola | extracellular | 29.86 | 30.65 |
| CDY08450 | Canola | extracellular | 28.7 | 30.65 |
| CDY14065 | Canola | extracellular | 28.7 | 30.56 |
| CDY05006 | Canola | extracellular | 28.7 | 30.56 |
| CDX70058 | Canola | extracellular | 29.57 | 30.54 |
| CDY58884 | Canola | extracellular | 28.99 | 30.21 |
| CDY50569 | Canola | extracellular, vacuole | 28.41 | 30.15 |
| CDX70059 | Canola | extracellular | 28.99 | 29.94 |
| CDY58887 | Canola | extracellular | 28.41 | 29.7 |
| CDX98966 | Canola | extracellular | 28.7 | 29.64 |
| CDX70060 | Canola | extracellular | 28.41 | 29.52 |
| CDY58888 | Canola | extracellular | 28.99 | 29.24 |
| CDX98965 | Canola | extracellular | 28.12 | 29.22 |
| CDX81023 | Canola | extracellular | 28.12 | 28.36 |
| CDY58889 | Canola | extracellular | 28.12 | 27.95 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.96 | 24.16 |
| CDY40923 | Canola | extracellular, vacuole | 31.01 | 22.81 |
| CDX70056 | Canola | extracellular | 26.67 | 22.72 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.72 | 22.7 |
| CDY15279 | Canola | plastid | 27.54 | 22.3 |
| CDX88024 | Canola | extracellular, vacuole | 37.68 | 22.15 |
| CDX80361 | Canola | extracellular, vacuole | 37.1 | 21.81 |
| CDY64876 | Canola | extracellular, vacuole | 35.94 | 21.27 |
| CDY16850 | Canola | plastid | 30.14 | 21.01 |
| CDY38783 | Canola | extracellular | 24.93 | 20.98 |
| CDY11623 | Canola | extracellular | 25.22 | 20.81 |
| CDX93758 | Canola | plastid | 14.49 | 19.46 |
| CDX81022 | Canola | extracellular, plasma membrane | 24.35 | 16.6 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlants:CDX85681 | ProteinID:CDX85681 | ProteinID:CDX85681.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00143419001 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF00560 | PFAM:PF08263 | PFAM:PF13855 | PFscan:PS51257 |
| PANTHER:PTHR44401 | PANTHER:PTHR44401:SF2 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF216E |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g01320D
Coordinates
chrLK031842:-:1177303..1178605
Molecular Weight (calculated)
36734.6 Da
IEP (calculated)
8.483
GRAVY (calculated)
0.146
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAKKKAVVF YNAVVLLLAT VAAQACLPSD RAALLEFRSH LNEPYIGVFN SWKGQDCCHG WYGRAKRKGV MTGSISPAIC ELTQLSGVTL SDWEGISGEI
101: PACITNLPAM RHVDLVGNKI SGTIPANIGN LAKLTVLNLA DNQISGAIPA SIARLTSLTH LDLRNNGLTG VIPVYIGRLK MLSRVLLSGN KLSGQIPESL
201: TRIYRLADLE LSMNRITGPI PPSFGRMSVL ATLNLDGNLI SGEIPGSLMT SSISNLNLSG NFISGKIPNA FGPRSYFTVL DLSNNRLEGV IPESITTASF
301: VGHLDVSHNQ LCGKIPAGSP FDHLDATSFG YNRCLCGTPL GDCGK
101: PACITNLPAM RHVDLVGNKI SGTIPANIGN LAKLTVLNLA DNQISGAIPA SIARLTSLTH LDLRNNGLTG VIPVYIGRLK MLSRVLLSGN KLSGQIPESL
201: TRIYRLADLE LSMNRITGPI PPSFGRMSVL ATLNLDGNLI SGEIPGSLMT SSISNLNLSG NFISGKIPNA FGPRSYFTVL DLSNNRLEGV IPESITTASF
301: VGHLDVSHNQ LCGKIPAGSP FDHLDATSFG YNRCLCGTPL GDCGK
001: MNSSFTLFIF TFVIFLQCLN PTGAATCHPD DEAGLLAFKA GITRDPSGIL SSWKKGTACC SWNGVTCLTT DRVSALSVAG QADVAGSFLS GTLSPSLAKL
101: KHLDGIYFTD LKNITGSFPQ FLFQLPNLKY VYIENNRLSG TLPANIGALS QLEAFSLEGN RFTGPIPSSI SNLTLLTQLK LGNNLLTGTI PLGVANLKLM
201: SYLNLGGNRL TGTIPDIFKS MPELRSLTLS RNGFSGNLPP SIASLAPILR FLELGHNKLS GTIPNFLSNF KALDTLDLSK NRFSGVIPKS FANLTKIFNL
301: DLSHNLLTDP FPVLNVKGIE SLDLSYNQFH LNTIPKWVTS SPIIFSLKLA KCGIKMSLDD WKPAQTFYYD FIDLSENEIT GSPARFLNQT EYLVEFKAAG
401: NKLRFDMGKL TFAKTLTTLD ISRNLVFGKV PAMVAGLKTL NVSHNHLCGK LPVTKFPASA FVGNDCLCGS PLSPCKA
101: KHLDGIYFTD LKNITGSFPQ FLFQLPNLKY VYIENNRLSG TLPANIGALS QLEAFSLEGN RFTGPIPSSI SNLTLLTQLK LGNNLLTGTI PLGVANLKLM
201: SYLNLGGNRL TGTIPDIFKS MPELRSLTLS RNGFSGNLPP SIASLAPILR FLELGHNKLS GTIPNFLSNF KALDTLDLSK NRFSGVIPKS FANLTKIFNL
301: DLSHNLLTDP FPVLNVKGIE SLDLSYNQFH LNTIPKWVTS SPIIFSLKLA KCGIKMSLDD WKPAQTFYYD FIDLSENEIT GSPARFLNQT EYLVEFKAAG
401: NKLRFDMGKL TFAKTLTTLD ISRNLVFGKV PAMVAGLKTL NVSHNHLCGK LPVTKFPASA FVGNDCLCGS PLSPCKA
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.