CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
extracellular 7
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g01750.t01	Wine grape	extracellular	57.18	55.77
GSMUA_Achr10P...	Banana	cytosol	42.82	55.27
KRH23157	Soybean	nucleus	56.62	54.62
AT3G20820.1	Thale cress	extracellular	56.06	54.52
Bra035741.1-P	Field mustard	extracellular	55.77	54.25
CDY19601	Canola	extracellular	55.77	54.25
PGSC0003DMT400003166	Potato	extracellular, vacuole	54.93	53.57
CDY06385	Canola	extracellular	54.93	53.42
GSMUA_Achr4P01520_001	Banana	cytosol	41.13	53.09
Solyc11g056680.1.1	Tomato	extracellular	54.37	53.02
CDY27559	Canola	extracellular	54.37	52.88
CDY60388	Canola	extracellular	53.52	52.05
KRH24680	Soybean	extracellular	52.96	51.51
KRH27500	Soybean	endoplasmic reticulum, extracellular	51.27	49.86
KRH20845	Soybean	endoplasmic reticulum	51.27	49.73
KRH29680	Soybean	endoplasmic reticulum	53.52	49.1
KRH43480	Soybean	nucleus	49.3	48.88
AT5G12940.1	Thale cress	extracellular	50.99	48.79
Bra023383.1-P	Field mustard	extracellular	47.04	48.13
CDX85681	Canola	extracellular	46.76	48.12
Bra023925.1-P	Field mustard	extracellular	50.7	47.87
CDX91155	Canola	extracellular	46.48	47.69
Bra008870.1-P	Field mustard	extracellular	49.3	46.92
CDY69275	Canola	extracellular	48.73	46.26
CDY53975	Canola	extracellular	48.45	46.11
CDY68308	Canola	extracellular	48.45	45.99
CDY69775	Canola	extracellular, plasma membrane	48.73	45.89
Bra008869.1-P	Field mustard	extracellular, plasma membrane	48.17	45.72
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	47.89	45.7
TraesCS7D01G243300.1	Wheat	extracellular	47.04	43.95
TraesCS7B01G146800.1	Wheat	extracellular	47.04	43.95
Os08t0505900-01	Rice	extracellular	47.04	43.95
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.76	43.68
HORVU7Hr1G050110.1	Barley	vacuole	46.76	42.78
KRH12883	Soybean	cytosol	19.15	42.77
HORVU7Hr1G050140.1	Barley	plastid	46.76	42.56
Zm00001d031434_P001	Maize	extracellular	45.35	42.26
EES14271	Sorghum	cytosol	45.92	40.65
KRG91824	Soybean	extracellular	27.04	40.0
KRH58374	Soybean	endoplasmic reticulum	28.17	29.85
KRH58377	Soybean	endoplasmic reticulum	27.89	29.64
KRH42258	Soybean	extracellular	27.32	29.22
KRH42255	Soybean	cytosol, extracellular, mitochondrion, plastid	11.55	29.08
KRH12977	Soybean	nucleus	27.61	28.91
KRH58376	Soybean	endoplasmic reticulum	27.32	28.87
KRG95348	Soybean	mitochondrion	27.61	27.92
KRH42256	Soybean	endoplasmic reticulum	25.92	27.38
KRH42259	Soybean	extracellular	25.63	27.33
KRH12976	Soybean	cytosol	28.17	26.88
KRH58375	Soybean	extracellular, plastid	16.62	25.0
KRH56366	Soybean	nucleus	30.42	22.09
KRH36172	Soybean	nucleus	37.18	22.04
KRG90583	Soybean	extracellular	34.08	21.88
KRH45818	Soybean	plasma membrane	32.68	18.01
KRH08128	Soybean	cytosol	30.99	17.94
KRH74736	Soybean	endoplasmic reticulum, extracellular, plasma membrane	31.27	17.4
KRH56365	Soybean	cytosol	6.2	13.33

Protein Annotations

EntrezGene:100778852	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02007182	EnsemblPlantsGene:GLYMA_12G055600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	UniProt:K7LT82	EnsemblPlants:KRH24681
ProteinID:KRH24681	ProteinID:KRH24681.1	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF08263
PFAM:PF13855	PANTHER:PTHR44401	PANTHER:PTHR44401:SF2	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI00023D0170

Description

hypothetical protein

Coordinates

chr12:+:4035828..4037173

Molecular Weight (calculated)

38907.5 Da

IEP (calculated)

9.473

GRAVY (calculated)

0.010

Length

355 amino acids

Sequence
(BLAST)

001: MGGASVNFSM ALVVMTLVGL TPLSVTSCPS SEWAALMSFK EALKEPYRGF FHSWRGTNCC YRWHGITCDP TTRRVADITL RGGDMMTGHI SPSICNLTQL
101: SSITISDWKG ISGNIPPCIT KLPLLQILDL SGNLIHGQIP SDIGRLTQLT MLNLADNHIS GKIPNSLVHL SNLMQLDLRN NAIQGPIPMD LGRLKKLNRA
201: LLSHNLITGR IPRSISEIYG LADLDLSLNR LSGSIPAWLG RMAVLDSLNL KYNNLTGNIP WTVLGSRMSH VDLSRNALSG RIPNSFGEDS YFISLDLSYN
301: NLRGSVPKSM ALVNYIGYLD LSHNNCLCGR MPRGVAFNHL QPLKPCSRAS GRMHA

Best Arabidopsis Sequence Match ( AT1G33590.2 )
(BLAST)

001: MQMDWSKTST LTSQLSSNLF PTTNSSLLSI NTTQFTTMNS SFTLFIFTFV IFLQCLNPTG AATCHPDDEA GLLAFKAGIT RDPSGILSSW KKGTACCSWN
101: GVTCLTTDRV SALSVAGQAD VAGSFLSGTL SPSLAKLKHL DGIYFTDLKN ITGSFPQFLF QLPNLKYVYI ENNRLSGTLP ANIGALSQLE AFSLEGNRFT
201: GPIPSSISNL TLLTQLKLGN NLLTGTIPLG VANLKLMSYL NLGGNRLTGT IPDIFKSMPE LRSLTLSRNG FSGNLPPSIA SLAPILRFLE LGHNKLSGTI
301: PNFLSNFKAL DTLDLSKNRF SGVIPKSFAN LTKIFNLDLS HNLLTDPFPV LNVKGIESLD LSYNQFHLNT IPKWVTSSPI IFSLKLAKCG IKMSLDDWKP
401: AQTFYYDFID LSENEITGSP ARFLNQTEYL VEFKAAGNKL RFDMGKLTFA KTLTTLDISR NLVFGKVPAM VAGLKTLNVS HNHLCGKLPV TKFPASAFVG
501: NDCLCGSPLS PCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.