CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45818	Soybean	plasma membrane	75.24	74.53
VIT_01s0026g01200.t01	Wine grape	extracellular, plasma membrane	61.91	61.62
PGSC0003DMT400058200	Potato	extracellular, vacuole	56.43	56.6
Solyc05g006670.1.1	Tomato	extracellular	55.96	56.13
KRH08128	Soybean	cytosol	41.07	42.74
KRH58374	Soybean	endoplasmic reticulum	19.12	36.42
KRH56365	Soybean	cytosol	9.25	35.76
KRH58377	Soybean	endoplasmic reticulum	18.65	35.63
KRH36172	Soybean	nucleus	32.92	35.06
KRG90583	Soybean	extracellular	30.25	34.9
KRH56366	Soybean	nucleus	26.65	34.76
KRH23157	Soybean	nucleus	19.75	34.24
KRH58376	Soybean	endoplasmic reticulum	18.03	34.23
KRH24680	Soybean	extracellular	19.12	33.42
KRH27500	Soybean	endoplasmic reticulum, extracellular	18.81	32.88
KRH42256	Soybean	endoplasmic reticulum	17.08	32.44
KRH43480	Soybean	nucleus	18.18	32.4
KRH12977	Soybean	nucleus	17.08	32.15
KRH12883	Soybean	cytosol	7.99	32.08
KRH29680	Soybean	endoplasmic reticulum	19.28	31.78
KRH20845	Soybean	endoplasmic reticulum	18.18	31.69
KRH42258	Soybean	extracellular	16.46	31.63
KRG95348	Soybean	mitochondrion	17.24	31.34
KRH24681	Soybean	extracellular	17.4	31.27
KRH42259	Soybean	extracellular	16.3	31.23
KRH42255	Soybean	cytosol, extracellular, mitochondrion, plastid	6.9	31.21
KRH12976	Soybean	cytosol	18.03	30.91
KRG91824	Soybean	extracellular	10.19	27.08
KRH58375	Soybean	extracellular, plastid	9.72	26.27

Protein Annotations

EntrezGene:100799647	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02000066	UniProt:C6ZS05	EMBL:FJ014846
EnsemblPlantsGene:GLYMA_01G039600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR001611
InterPro:IPR032675	EnsemblPlants:KRH74736	ProteinID:KRH74736	ProteinID:KRH74736.1	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855
PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF219	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0001B06D50	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:4300332..4302844

Molecular Weight (calculated)

68471.7 Da

IEP (calculated)

4.842

GRAVY (calculated)

0.024

Length

638 amino acids

Sequence
(BLAST)

001: MNYELLQIVA LLTVIAFGGA LRKATGACGS DDLEGLMGFK NGIQMDTSGR LAKWVGRSCC EWEGVVCDNA TTRVTQINLP GLIEKDLFQT QMVGQLSPSI
101: TLLTSLEILD LGGLVGLTGT IPQTIGLQMP NLQKLYLYGN NLTGPVPESI GDLPRLQELA LHENKISGSI PSTIGSLKKL KSLLLYSNQI SGTIPFSLGN
201: LTNLVELDVH DNAIMGQVPN SIGQMQALEK LDLSSNMLSG SIPSSLTNLT AISVLYMDTN YLEGTIPFPS RSGEMPSLGF LRLHNNHLSG NIPPSFGYLV
301: SLKRVSLSNN KIEGALPSSL GNLHSLTELY LSDNSFSGQI PKSIGQLSQL IMLNISSNLI EWPLPQEISS LQNLQTLDLS FNPLNLSSIP PWLTSISSLS
401: RISLAGCGIK GQIPDSLQTT QSPIQELDLS GNLLSGSIPS WIGSLSQLYL LNLSSNSLDS HIPESLTNLP DLGVLDLHSN KLTGSIAGVF DTEQGTLTYI
501: DLSDNNFSSG VEAIGVGEQL NIQYLNLSHN LLKGTLPSSL GKLNSIHSLD LSFNELASNL PEMLAKLTLL ERLKLQGNHF SGKIPSGFLK LKKLKELDLS
601: DNVLEGEIPE GKPLTDFPGS TYSGNKGLCG KPLNPCKE

Best Arabidopsis Sequence Match ( AT5G23400.1 )
(BLAST)

001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK

Arabidopsis Description

Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.