CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42258	Soybean	extracellular	69.07	69.28
KRH58374	Soybean	endoplasmic reticulum	64.26	63.88
KRH42256	Soybean	endoplasmic reticulum	64.26	63.69
KRH58377	Soybean	endoplasmic reticulum	60.36	60.18
KRH58376	Soybean	endoplasmic reticulum	59.16	58.63
KRH42255	Soybean	cytosol, extracellular, mitochondrion, plastid	24.02	56.74
KRH58375	Soybean	extracellular, plastid	39.04	55.08
KRG95348	Soybean	mitochondrion	48.05	45.58
KRH12977	Soybean	nucleus	46.25	45.43
KRH12976	Soybean	cytosol	45.05	40.32
KRH43480	Soybean	nucleus	30.03	27.93
KRH23157	Soybean	nucleus	30.63	27.72
KRH27500	Soybean	endoplasmic reticulum, extracellular	29.73	27.12
KRH20845	Soybean	endoplasmic reticulum	29.73	27.05
KRH24680	Soybean	extracellular	29.13	26.58
KRH12883	Soybean	cytosol	12.31	25.79
KRH24681	Soybean	extracellular	27.33	25.63
KRH29680	Soybean	endoplasmic reticulum	28.23	24.29
KRG91824	Soybean	extracellular	15.92	22.08
KRH56366	Soybean	nucleus	30.63	20.86
KRH36172	Soybean	nucleus	32.73	18.2
KRG90583	Soybean	extracellular	30.03	18.08
KRH56365	Soybean	cytosol	8.41	16.97
KRH08128	Soybean	cytosol	30.03	16.31
KRH74736	Soybean	endoplasmic reticulum, extracellular, plasma membrane	31.23	16.3
KRH45818	Soybean	plasma membrane	30.63	15.84

Protein Annotations

EMBL:ACUP02004794	EnsemblPlants:KRH42259	EnsemblPlantsGene:GLYMA_08G079200	EntrezGene:548041	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PANTHER:PTHR44138	PFAM:PF08263	ProteinID:CAI99395.1	ProteinID:KRH42259
ProteinID:KRH42259.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI0000DB841B	UniProt:Q0WX02
MapMan:26.8.3.4	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:6027687..6029008

Molecular Weight (calculated)

36652.6 Da

IEP (calculated)

7.980

GRAVY (calculated)

0.081

Length

333 amino acids

Sequence
(BLAST)

001: MIMVLLIVLY LSAPALSKLC NQDKQVLLQI KKELGNPTKL SSWLPTTDYC DTIWEGVACV TDSNNQTCRV DILYLSHLNL PKPYPIPPSI GNLPYLNYLY
101: LIDTNFFGAI PSSIANLTNL NYLNITYTNV SGTIPDFLSH IKTLVSIDFS YNNLSGNLPA SLSSLPNLGE MIFTGNRISG AIPDSFGSFS EELILMRLSR
201: NRLTGKIPAT LAKLNLRFLD LSRNMLEGDA SVLFGSEKDT VQINLGKNNL AFDLGKVEFS EILAILDLRH NRIYGTLPQG LTALKHLTKL NVSNNNLCGE
301: IPQGGNLQRI KVNSYAHNKC LCGSPLPACT LVN

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.