CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56366	Soybean	nucleus	92.12	31.08
KRH58374	Soybean	endoplasmic reticulum	20.61	10.15
KRG90583	Soybean	extracellular	32.73	9.76
KRH58375	Soybean	extracellular, plastid	13.94	9.75
KRH58377	Soybean	endoplasmic reticulum	19.39	9.58
KRH08128	Soybean	cytosol	35.15	9.46
KRH74736	Soybean	endoplasmic reticulum, extracellular, plasma membrane	35.76	9.25
KRH42256	Soybean	endoplasmic reticulum	18.79	9.23
KRH42258	Soybean	extracellular	18.18	9.04
KRH36172	Soybean	nucleus	32.73	9.02
KRH45818	Soybean	plasma membrane	35.15	9.01
KRH43480	Soybean	nucleus	19.39	8.94
KRH58376	Soybean	endoplasmic reticulum	17.58	8.63
KRH12977	Soybean	nucleus	17.58	8.55
KRG95348	Soybean	mitochondrion	18.18	8.55
KRH27500	Soybean	endoplasmic reticulum, extracellular	18.79	8.49
KRH20845	Soybean	endoplasmic reticulum	18.79	8.47
KRH23157	Soybean	nucleus	18.79	8.42
KRH42259	Soybean	extracellular	16.97	8.41
KRH24680	Soybean	extracellular	18.18	8.22
KRH29680	Soybean	endoplasmic reticulum	18.18	7.75
KRH12976	Soybean	cytosol	16.97	7.53
KRH24681	Soybean	extracellular	13.33	6.2
PGSC0003DMT400010749	Potato	extracellular	1.21	0.57
Solyc01g011050.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	1.21	0.57
KRH42255	Soybean	cytosol, extracellular, mitochondrion, plastid	0.0	0.0
KRH12883	Soybean	cytosol	0.0	0.0
KRG91824	Soybean	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02004112	EnsemblPlants:KRH56365	EnsemblPlantsGene:GLYMA_06G319600	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR45271
PFAM:PF00560	ProteinID:KRH56365	ProteinID:KRH56365.1	SUPFAM:SSF52058	UniParc:UPI0006EDA0B8	UniProt:A0A0R0JNZ6
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:50850034..50851207

Molecular Weight (calculated)

18242.0 Da

IEP (calculated)

8.471

GRAVY (calculated)

-0.039

Length

165 amino acids

Sequence
(BLAST)

001: MNVKGIESLD LSNNSFHLRN IPKWVASSPI IFSLKLANCG IKMRLEDFKP SETQFYDFID LSGNEISGSA IGLVNSTEYL VGFWVSGNML KFDLGKLRFG
101: ERFKYLDLSG NSVFGKVPNS VVGLEKLDLS YNHLCGQLPK NKFPASAFVG NDCLCGSPLY PCKKA

Best Arabidopsis Sequence Match ( AT1G33590.2 )
(BLAST)

001: MQMDWSKTST LTSQLSSNLF PTTNSSLLSI NTTQFTTMNS SFTLFIFTFV IFLQCLNPTG AATCHPDDEA GLLAFKAGIT RDPSGILSSW KKGTACCSWN
101: GVTCLTTDRV SALSVAGQAD VAGSFLSGTL SPSLAKLKHL DGIYFTDLKN ITGSFPQFLF QLPNLKYVYI ENNRLSGTLP ANIGALSQLE AFSLEGNRFT
201: GPIPSSISNL TLLTQLKLGN NLLTGTIPLG VANLKLMSYL NLGGNRLTGT IPDIFKSMPE LRSLTLSRNG FSGNLPPSIA SLAPILRFLE LGHNKLSGTI
301: PNFLSNFKAL DTLDLSKNRF SGVIPKSFAN LTKIFNLDLS HNLLTDPFPV LNVKGIESLD LSYNQFHLNT IPKWVTSSPI IFSLKLAKCG IKMSLDDWKP
401: AQTFYYDFID LSENEITGSP ARFLNQTEYL VEFKAAGNKL RFDMGKLTFA KTLTTLDISR NLVFGKVPAM VAGLKTLNVS HNHLCGKLPV TKFPASAFVG
501: NDCLCGSPLS PCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.