Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45818 | Soybean | plasma membrane | 62.4 | 62.11 |
| KRH74736 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 61.62 | 61.91 |
| PGSC0003DMT400058200 | Potato | extracellular, vacuole | 56.63 | 57.08 |
| Solyc05g006670.1.1 | Tomato | extracellular | 55.85 | 56.29 |
| VIT_04s0023g02870.t01 | Wine grape | extracellular | 38.85 | 38.72 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 20.59 | 36.26 |
| VIT_13s0064g01260.t01 | Wine grape | extracellular | 20.12 | 36.24 |
| VIT_10s0071g00860.t01 | Wine grape | extracellular, vacuole | 33.39 | 36.21 |
| VIT_13s0064g01370.t01 | Wine grape | extracellular | 17.0 | 32.83 |
| VIT_08s0007g07690.t01 | Wine grape | extracellular | 17.16 | 31.98 |
| VIT_18s0089g00010.t01 | Wine grape | plasma membrane | 24.96 | 16.75 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:CCB56608 | ProteinID:CCB56608.1 | UniProt:F6HPI0 | EMBL:FN596002 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 | PFAM:PF08263 | PFAM:PF13855 |
| PRINTS:PR00019 | PFscan:PS51450 | PANTHER:PTHR44401 | PANTHER:PTHR44401:SF1 | SMART:SM00369 | SUPFAM:SSF52058 |
| SignalP:SignalP-noTM | UniParc:UPI0001982A8C | ArrayExpress:VIT_01s0026g01200 | EnsemblPlantsGene:VIT_01s0026g01200 | EnsemblPlants:VIT_01s0026g01200.t01 | unigene:Vvi.16068 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:10197711..10200282
Molecular Weight (calculated)
70515.1 Da
IEP (calculated)
7.812
GRAVY (calculated)
-0.007
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCRLLWIIV AFTLISMGES KKSTGESCHP DDLMGLISFK AGIRIDTSGR LERWVGRSCC KWEGISCDNT TGRVTQLLLP GFISTDVSIL QTQMKGSLSP
101: KITLLTSLQV IDLSELSFIT GNIPTSIGFH LPNLRKLYLL RNKLSGPIPE SIGKLSKLEE IILSENRFSG SLPLSLGNLK NLNRLLLDSN QFSGAIPDSL
201: VNLTILVVLD LHHNYLNGHM PAKIGELQVL EQLDLSENLL SGKIPVSLTN ITTVQDIDLS NNSLEGEIPF PSCSGQMPFL RFLALHHNHL TGRIPPALGY
301: LVSLQRLYLE NNKLNGPIPS SLGNLSDLRE LYLSGNRLSG LIPIAFSRLS QLINLNLSNN LIRGLPHEMS SLQNLQTLTL SFNPLNFSSI PKWMAELPSI
401: SQIYMAGCGL QGEIPEFLQR KPIQELDLSA NHLTGSIPSW LGGLSQLYLL NLSKNALVSE IPDSITRLHE LGVLDLHSNK LTGSIIEVFK MGSILPGGSL
501: RYIDLSHNSF SSGIEQIGAG EQHGIEFLNL SHNFLKGRLP TSIGRLELMR SLDLSHNELG FNLPESLGNV KSLERLKLEK NRFTGKIPDG YLMLRKLKEL
601: DLSDNLLVGQ IPNGKPLDDF PRSSYSGNRA LCGRPLAPCK P
101: KITLLTSLQV IDLSELSFIT GNIPTSIGFH LPNLRKLYLL RNKLSGPIPE SIGKLSKLEE IILSENRFSG SLPLSLGNLK NLNRLLLDSN QFSGAIPDSL
201: VNLTILVVLD LHHNYLNGHM PAKIGELQVL EQLDLSENLL SGKIPVSLTN ITTVQDIDLS NNSLEGEIPF PSCSGQMPFL RFLALHHNHL TGRIPPALGY
301: LVSLQRLYLE NNKLNGPIPS SLGNLSDLRE LYLSGNRLSG LIPIAFSRLS QLINLNLSNN LIRGLPHEMS SLQNLQTLTL SFNPLNFSSI PKWMAELPSI
401: SQIYMAGCGL QGEIPEFLQR KPIQELDLSA NHLTGSIPSW LGGLSQLYLL NLSKNALVSE IPDSITRLHE LGVLDLHSNK LTGSIIEVFK MGSILPGGSL
501: RYIDLSHNSF SSGIEQIGAG EQHGIEFLNL SHNFLKGRLP TSIGRLELMR SLDLSHNELG FNLPESLGNV KSLERLKLEK NRFTGKIPDG YLMLRKLKEL
601: DLSDNLLVGQ IPNGKPLDDF PRSSYSGNRA LCGRPLAPCK P
001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK
Arabidopsis Description
Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.