Factsheet for VIT_10s0071g00860.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36172	Soybean	nucleus	67.01	66.11
PGSC0003DMT400065091	Potato	extracellular	66.33	66.1
Solyc04g008830.1.1	Tomato	nucleus	65.31	65.09
KRG90583	Soybean	extracellular	60.24	64.38
GSMUA_Achr1P06920_001	Banana	plastid	23.69	62.22
Bra026499.1-P	Field mustard	plastid	49.92	59.6
CDY16850	Canola	plastid	49.58	59.19
CDX88024	Canola	extracellular, vacuole	58.71	59.11
Bra009680.1-P	Field mustard	extracellular, vacuole	58.54	58.94
CDX80361	Canola	extracellular, vacuole	58.54	58.94
AT5G23400.1	Thale cress	vacuole	58.54	58.74
CDY64876	Canola	extracellular, vacuole	56.68	57.46
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	38.75	51.23
Os04t0677200-01	Rice	cytosol, peroxisome	37.73	51.03
TraesCS2D01G561100.1	Wheat	extracellular	38.07	50.79
TraesCS2B01G590900.1	Wheat	extracellular	38.24	50.56
KXG27431	Sorghum	vacuole	43.49	49.05
Zm00001d026617_P001	Maize	extracellular	42.81	49.03
HORVU2Hr1G119550.1	Barley	cytosol	23.18	39.03
VIT_13s0064g01260.t01	Wine grape	extracellular	21.66	35.96
VIT_06s0004g01750.t01	Wine grape	extracellular	21.83	35.44
VIT_01s0026g01200.t01	Wine grape	extracellular, plasma membrane	36.21	33.39
VIT_04s0023g02870.t01	Wine grape	extracellular	35.7	32.81
VIT_08s0007g07690.t01	Wine grape	extracellular	18.61	31.98
VIT_13s0064g01370.t01	Wine grape	extracellular	16.92	30.12
VIT_18s0089g00010.t01	Wine grape	plasma membrane	29.44	18.22

Protein Annotations

EntrezGene:100252685	wikigene:100252685	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB58850	ProteinID:CCB58850.1
UniProt:F6HVY7	EMBL:FN596260	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0009506	GO:GO:0030312	InterPro:IPR001611	InterPro:IPR032675
EntrezGene:LOC100252685	wikigene:LOC100252685	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR43887	PANTHER:PTHR43887:SF22	SMART:SM00369
SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI00019858EE	ArrayExpress:VIT_10s0071g00860	EnsemblPlantsGene:VIT_10s0071g00860	EnsemblPlants:VIT_10s0071g00860.t01
RefSeq:XP_002267653	RefSeq:XP_002267653.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:+:17401319..17403115

Molecular Weight (calculated)

64183.7 Da

IEP (calculated)

8.546

GRAVY (calculated)

-0.009

Length

591 amino acids

Sequence
(BLAST)

001: MQNLRWVCKH LLILSLCHMV SGGLAQSQTT PICYEADRAA LLGFKARILK DTTEALSSWT GRDCCGGGWE GVECNPATGR VVGLMLQRPA DRDSGIYMKG
101: TLSSSLGALQ FLEVMVISGM KHITGSIPES FSNLTHLKQL VLEDNSLGGA IPSSLGHLPL LKAISLSGNQ LRGQIPPSFG NFRGLEQFNL GRNLLTGPIP
201: PTFKNLHSLQ YFDLSSNLIS GLIPDFVGQF HNLTFIDFSH NQFSGQIPNS ICSLPSLLDI SLSHNKLTGR IPDQIGSLKS LTTLSLSNNL LTGQLPESIA
301: RMQNLWQLNL SRNGLSDPLP GGLPKGLPSL LSIDLSYNNF NLGTIPQWIT GRVLADVNLA GCKLRGTLPI FSRPDSLTSI DLSNNYFTAG ISNFFRNMSS
401: LQKVNLSHNQ LKSDISVLRW PQGLSSLDLH SNQLYGSLYT ILNNTSSFLE AIDVSGNQIS GGIPEFSEGS SLKSLNIAAN KIAGHIPNSI SDLIELEKLD
501: ISRNQITGTI PTSLGLLLKI QWLDVSINRL TGKIPETLLG IEGLRHANFR ANRLCGEIPQ GRPFNIFPAV AYAHNLCLCG KPMPPCRGKQ Q

Best Arabidopsis Sequence Match ( AT5G23400.1 )
(BLAST)

001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK

Arabidopsis Description

Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.