Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035741.1-P | Field mustard | extracellular | 98.9 | 98.9 |
| CDY19601 | Canola | extracellular | 98.9 | 98.9 |
| AT3G20820.1 | Thale cress | extracellular | 93.15 | 93.15 |
| CDY27559 | Canola | extracellular | 91.78 | 91.78 |
| CDY60388 | Canola | extracellular | 91.51 | 91.51 |
| KRH23157 | Soybean | nucleus | 74.52 | 73.91 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 71.51 | 71.7 |
| Solyc11g056680.1.1 | Tomato | extracellular | 67.4 | 67.58 |
| PGSC0003DMT400003166 | Potato | extracellular, vacuole | 67.12 | 67.31 |
| CDX85681 | Canola | extracellular | 60.55 | 64.06 |
| CDX91155 | Canola | extracellular | 60.55 | 63.87 |
| CDY69775 | Canola | extracellular, plasma membrane | 63.84 | 61.8 |
| CDY53975 | Canola | extracellular | 63.01 | 61.66 |
| CDY68308 | Canola | extracellular | 63.01 | 61.5 |
| CDY69275 | Canola | extracellular | 63.01 | 61.5 |
| GSMUA_Achr10P... | Banana | cytosol | 46.3 | 61.45 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 46.03 | 61.09 |
| KRH24680 | Soybean | extracellular | 59.18 | 59.18 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 58.63 | 57.53 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.08 | 56.99 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 57.53 | 56.45 |
| CDY52664 | Canola | extracellular | 57.53 | 56.3 |
| CDY50534 | Canola | extracellular, vacuole | 57.53 | 56.3 |
| KRH29680 | Soybean | endoplasmic reticulum | 58.9 | 55.56 |
| KRH24681 | Soybean | extracellular | 53.42 | 54.93 |
| Os08t0505900-01 | Rice | extracellular | 56.44 | 54.21 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 52.88 | 50.79 |
| Zm00001d031434_P001 | Maize | extracellular | 52.88 | 50.66 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 52.6 | 50.53 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 52.6 | 50.53 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 53.15 | 50.0 |
| HORVU7Hr1G050140.1 | Barley | plastid | 53.15 | 49.74 |
| EES14271 | Sorghum | cytosol | 53.97 | 49.13 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 30.14 | 33.74 |
| CDY42127 | Canola | extracellular | 29.32 | 32.82 |
| CDY52623 | Canola | extracellular, vacuole | 28.77 | 32.31 |
| CDY58884 | Canola | extracellular | 29.04 | 32.02 |
| CDY50569 | Canola | extracellular, vacuole | 28.22 | 31.69 |
| CDX70057 | Canola | extracellular | 29.04 | 31.55 |
| CDY58887 | Canola | extracellular | 28.49 | 31.52 |
| CDX98967 | Canola | extracellular | 28.77 | 31.25 |
| CDY14065 | Canola | extracellular | 27.67 | 31.17 |
| CDY58888 | Canola | extracellular | 29.04 | 30.99 |
| CDY05006 | Canola | extracellular | 27.4 | 30.86 |
| CDX70059 | Canola | extracellular | 28.22 | 30.84 |
| CDX70058 | Canola | extracellular | 28.22 | 30.84 |
| CDY42130 | Canola | extracellular | 27.4 | 30.58 |
| CDX98966 | Canola | extracellular | 27.95 | 30.54 |
| CDX98965 | Canola | extracellular | 27.67 | 30.42 |
| CDY08448 | Canola | extracellular | 27.12 | 30.28 |
| CDX70060 | Canola | extracellular | 27.4 | 30.12 |
| CDY08450 | Canola | extracellular | 26.58 | 30.03 |
| CDY42131 | Canola | extracellular | 26.58 | 30.03 |
| CDX81023 | Canola | extracellular | 27.67 | 29.53 |
| CDY42129 | Canola | cytosol | 25.75 | 29.01 |
| CDY58889 | Canola | extracellular | 27.12 | 28.53 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.4 | 25.97 |
| CDX70056 | Canola | extracellular | 27.12 | 24.44 |
| CDY64876 | Canola | extracellular, vacuole | 38.08 | 23.84 |
| CDX88024 | Canola | extracellular, vacuole | 37.26 | 23.17 |
| CDX80361 | Canola | extracellular, vacuole | 37.26 | 23.17 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 10.14 | 22.7 |
| CDY40923 | Canola | extracellular, vacuole | 28.77 | 22.39 |
| CDY15279 | Canola | plastid | 26.03 | 22.3 |
| CDY38783 | Canola | extracellular | 24.66 | 21.95 |
| CDY16850 | Canola | plastid | 29.32 | 21.62 |
| CDY11623 | Canola | extracellular | 24.38 | 21.29 |
| CDX93758 | Canola | plastid | 14.25 | 20.23 |
| CDX81022 | Canola | extracellular, plasma membrane | 23.56 | 17.0 |
Protein Annotations
| EnsemblPlants:CDY06385 | EnsemblPlantsGene:GSBRNA2T00122348001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44401 |
| PANTHER:PTHR44401:SF2 | PFAM:PF08263 | PFAM:PF13855 | ProteinID:CDY06385 | ProteinID:CDY06385.1 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI0004EE0622 | MapMan:35.1 | : | : |
Description
BnaC05g31450D
Coordinates
chrLK031969:+:142696..143984
Molecular Weight (calculated)
39870.6 Da
IEP (calculated)
8.621
GRAVY (calculated)
0.058
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLNVFVLLL LLLVSTATCC PPSDRRALLA FRAALHEPYL GIFNSWTGQD CCHNWYGVSC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHIAPAICD
101: LARLSAITIA DWKGISGEIP TCITRLPFLR TLDLIGNQIS GGIPNDIGRP HRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPPDFGRLTM
201: LSRALLSGNR ITGRIPESLT RIYRLADVDL SGNQLYGPIP PSLGRMAVLA TLNLDGNKFS GEIPQTLMTS SVMNLNLSRN MLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF SHLEAASFMY NDCLCGKPLR ACLKN
101: LARLSAITIA DWKGISGEIP TCITRLPFLR TLDLIGNQIS GGIPNDIGRP HRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPPDFGRLTM
201: LSRALLSGNR ITGRIPESLT RIYRLADVDL SGNQLYGPIP PSLGRMAVLA TLNLDGNKFS GEIPQTLMTS SVMNLNLSRN MLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF SHLEAASFMY NDCLCGKPLR ACLKN
001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.