CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038700.1-P	Field mustard	extracellular, vacuole	100.0	100.0
CDY52623	Canola	extracellular, vacuole	97.85	97.85
AT3G12145.1	Thale cress	extracellular	82.77	82.77
CDY08451	Canola	endoplasmic reticulum, extracellular	74.46	74.23
CDY42127	Canola	extracellular	74.46	74.23
CDY42130	Canola	extracellular	69.54	69.11
CDY08450	Canola	extracellular	68.31	68.73
CDY42131	Canola	extracellular	67.69	68.11
CDY08448	Canola	extracellular	68.0	67.58
CDY42129	Canola	cytosol	64.31	64.51
CDY05006	Canola	extracellular	63.38	63.58
CDY14065	Canola	extracellular	61.23	61.42
CDX98965	Canola	extracellular	54.46	53.31
CDX70058	Canola	extracellular	53.85	52.4
CDX70060	Canola	extracellular	53.23	52.11
CDX70059	Canola	extracellular	53.54	52.1
CDX98966	Canola	extracellular	53.54	52.1
CDY58884	Canola	extracellular	52.62	51.66
CDY58887	Canola	extracellular	51.38	50.61
CDX98967	Canola	extracellular	52.0	50.3
CDX70057	Canola	extracellular	52.0	50.3
CDY58888	Canola	extracellular	51.08	48.54
CDX81023	Canola	extracellular	50.46	47.95
CDY58889	Canola	extracellular	50.15	46.97
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	52.62	44.42
CDX70056	Canola	extracellular	52.31	41.98
CDX81022	Canola	extracellular, plasma membrane	44.62	28.66
CDY60388	Canola	extracellular	32.0	28.49
CDX85681	Canola	extracellular	30.15	28.41
CDY06385	Canola	extracellular	31.69	28.22
CDY19601	Canola	extracellular	31.69	28.22
CDX91155	Canola	extracellular	29.85	28.03
CDY52664	Canola	extracellular	32.0	27.88
CDY00787	Canola	endoplasmic reticulum, extracellular, vacuole	31.69	27.69
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	31.69	27.69
CDY27559	Canola	extracellular	31.08	27.67
CDY50534	Canola	extracellular, vacuole	31.69	27.61
CDY69775	Canola	extracellular, plasma membrane	29.85	25.73
CDY53975	Canola	extracellular	29.23	25.47
CDY68308	Canola	extracellular	29.23	25.4
CDY69275	Canola	extracellular	28.31	24.6
CDY15279	Canola	plastid	28.0	21.36
CDY38783	Canola	extracellular	26.77	21.22
CDY40923	Canola	extracellular, vacuole	29.85	20.68
CDY11623	Canola	extracellular	26.15	20.33
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	10.15	20.25
CDX93758	Canola	plastid	15.38	19.46
CDX88024	Canola	extracellular, vacuole	33.23	18.4
CDX80361	Canola	extracellular, vacuole	32.92	18.23
CDY64876	Canola	extracellular, vacuole	32.0	17.84
CDY16850	Canola	plastid	25.23	16.57

Protein Annotations

EnsemblPlants:CDY50569	EnsemblPlantsGene:GSBRNA2T00097000001	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	ProteinID:CDY50569	ProteinID:CDY50569.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	UniParc:UPI0002545413	UniProt:A0A078IMG6	MapMan:26.8.3.4	:	:

Description

BnaA01g30830DBnaA01g30830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMG6]

Coordinates

chrLK032922:+:86533..87914

Molecular Weight (calculated)

36000.4 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.057

Length

325 amino acids

Sequence
(BLAST)

001: MKLLLHLSIF FTILFISLPS SHSSSSNDKN ALLQIKKALN NPPLLSSWNP QTDFCTTWTG VECTNGRVTA LTISSGEISG QIPAQVGDLL ELRTLDFSYL
101: THLTGNIPHT ITKLKYLDLL RLKQTNLSGY IPDFISELKS VTFLDLSFNQ FTGPIPGSLS QMPKLDAIQI NDNKLTGSIP NSFGSFVGKV PNLYLFNNKL
201: SGKVPESLSK YDFNAVDLSG NSFTGDGSMF FGRNKTTIRV DLSRNMFEFD LSKVKFARSI VSLDLSHNKI FGKFPRELNK LRLEHFNVSY NHLCGKIPSG
301: GLLQTFEPSA FSHNLCLCGT PLKAC

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.