Factsheet for AT3G12145.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 8
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038700.1-P	Field mustard	extracellular, vacuole	82.77	82.77
CDY50569	Canola	extracellular, vacuole	82.77	82.77
CDY52623	Canola	extracellular, vacuole	82.46	82.46
AT5G06860.1	Thale cress	extracellular	54.46	53.64
AT5G06870.1	Thale cress	extracellular	49.23	48.48
AT3G12610.1	Thale cress	extracellular	33.54	29.3
AT3G20820.1	Thale cress	extracellular	32.0	28.49
AT5G12940.1	Thale cress	extracellular	32.31	28.3
AT1G33600.1	Thale cress	extracellular	36.92	25.1
AT2G26380.1	Thale cress	endoplasmic reticulum, extracellular	34.46	23.33
AT1G33612.1	Thale cress	extracellular	32.62	23.3
AT1G33670.1	Thale cress	extracellular	31.38	22.42
AT1G33610.1	Thale cress	extracellular, plasma membrane, vacuole	32.31	21.97
AT1G33590.2	Thale cress	plastid	33.85	21.4
AT5G23400.1	Thale cress	vacuole	34.15	18.85

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	EntrezGene:820391	UniProt:A0A178V9V7	ProteinID:AAG51067.1	ProteinID:AEE75158.1
EMBL:AF136588	ArrayExpress:AT3G12145	EnsemblPlantsGene:AT3G12145	RefSeq:AT3G12145	TAIR:AT3G12145	RefSeq:AT3G12145-TAIR-G
EnsemblPlants:AT3G12145.1	TAIR:AT3G12145.1	EMBL:AY057648	EMBL:AY059802	EMBL:AY085937	Unigene:At.17445
ProteinID:BAB01964.1	EMBL:BT001172	Symbol:FLR1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0007275	GO:GO:0008134	GO:GO:0008150	GO:GO:0009628	GO:GO:0009791
GO:GO:0010228	GO:GO:0016020	GO:GO:0048471	GO:GO:0048510	GO:GO:0048574	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	RefSeq:NP_974291.4	ProteinID:OAP02909.1
PFAM:PF08263	PFAM:PF13516	PO:PO:0000230	PO:PO:0000293	PO:PO:0020148	PFscan:PS51257
PANTHER:PTHR44138	UniProt:Q9LH52	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI00000AC18E	SEG:seg

Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]

Coordinates

chr3:-:3874487..3876302

Molecular Weight (calculated)

35810.2 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.042

Length

325 amino acids

Sequence
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.