Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G33670.1 | Thale cress | extracellular | 64.84 | 64.84 |
| AT2G26380.1 | Thale cress | endoplasmic reticulum, extracellular | 67.03 | 63.54 |
| AT1G33610.1 | Thale cress | extracellular, plasma membrane, vacuole | 66.59 | 63.39 |
| AT1G33590.2 | Thale cress | plastid | 70.55 | 62.45 |
| AT1G33600.1 | Thale cress | extracellular | 65.27 | 62.13 |
| PGSC0003DMT400043544 | Potato | extracellular | 55.16 | 52.51 |
| Solyc10g052880.1.1 | Tomato | extracellular | 53.85 | 51.26 |
| KRH56366 | Soybean | nucleus | 54.07 | 50.31 |
| AT3G12145.1 | Thale cress | extracellular | 23.3 | 32.62 |
| AT3G20820.1 | Thale cress | extracellular | 25.05 | 31.23 |
| AT5G12940.1 | Thale cress | extracellular | 24.84 | 30.46 |
| AT3G12610.1 | Thale cress | extracellular | 24.18 | 29.57 |
| AT5G06870.1 | Thale cress | extracellular | 20.44 | 28.18 |
| AT5G06860.1 | Thale cress | extracellular | 20.0 | 27.58 |
| AT5G23400.1 | Thale cress | vacuole | 35.6 | 27.5 |
| VIT_18s0089g00010.t01 | Wine grape | plasma membrane | 56.26 | 26.81 |
Protein Annotations
| EntrezGene:10723140 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:AEE31610.1 | ArrayExpress:AT1G33612 | EnsemblPlantsGene:AT1G33612 |
| RefSeq:AT1G33612 | TAIR:AT1G33612 | RefSeq:AT1G33612-TAIR-G | EnsemblPlants:AT1G33612.1 | TAIR:AT1G33612.1 | UniProt:F4HR92 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | RefSeq:NP_001185131.1 | PFAM:PF08263 | PFAM:PF13855 | PO:PO:0000293 |
| PRINTS:PR00019 | PANTHER:PTHR45271 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | UniParc:UPI0001E92BF8 | : |
Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4HR92]
Coordinates
chr1:+:12191133..12193270
Molecular Weight (calculated)
49859.7 Da
IEP (calculated)
9.234
GRAVY (calculated)
0.086
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSCSFNLFI LGAIIFLRCF RSTGAATCDP DDEAGLLGFK SGITKDPSGI LSSWKKGTDC CFWSGVFCVN NDRVTQLSVD GDFSLDGNSP SGTISPMLAK
101: LQHLERILLT SLRKITGPFP QFIFRLPKLN YINIQGCLLS GPLPANIGEL SQLKTLVIDG NMFTGHIPSS IANLTRLTWL NLGNNRLSGT IPNIFKSMKE
201: LNSLDLSRNG FFGRLPPSIA SLAPTLYYLD LSQNNLSGTI PNYLSRFEAL STLVLSKNKY SGVVPMSFTN LINITNLDLS HNLLTGPFPV LKSINGIESL
301: DLSYNKFHLK TIPKWMISSP SIYSLKLAKC GLKISLDDWK LAGTYYYDSI DLSENEISGS PAKFLSQMKY LMEFRAAGNK LRFDLGKLTF VRTLETLDLS
401: RNLIFGRVLA TFAGLKTMNV SQNHLCGKLP VTKFPASXFA GNDCLCGSPL SPCKV
101: LQHLERILLT SLRKITGPFP QFIFRLPKLN YINIQGCLLS GPLPANIGEL SQLKTLVIDG NMFTGHIPSS IANLTRLTWL NLGNNRLSGT IPNIFKSMKE
201: LNSLDLSRNG FFGRLPPSIA SLAPTLYYLD LSQNNLSGTI PNYLSRFEAL STLVLSKNKY SGVVPMSFTN LINITNLDLS HNLLTGPFPV LKSINGIESL
301: DLSYNKFHLK TIPKWMISSP SIYSLKLAKC GLKISLDDWK LAGTYYYDSI DLSENEISGS PAKFLSQMKY LMEFRAAGNK LRFDLGKLTF VRTLETLDLS
401: RNLIFGRVLA TFAGLKTMNV SQNHLCGKLP VTKFPASXFA GNDCLCGSPL SPCKV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.