Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- plastid 1
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52664 | Canola | extracellular | 88.44 | 88.2 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 88.17 | 88.17 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 87.9 | 87.9 |
| Bra001460.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 87.63 | 87.63 |
| Bra038737.1-P | Field mustard | endoplasmic reticulum, extracellular | 87.63 | 87.4 |
| CDY50534 | Canola | extracellular, vacuole | 87.37 | 87.13 |
| Solyc01g086920.2.1 | Tomato | nucleus | 28.76 | 65.24 |
| VIT_13s0064g01260.t01 | Wine grape | extracellular | 60.75 | 63.48 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 46.24 | 62.55 |
| KRH43480 | Soybean | nucleus | 58.87 | 61.17 |
| GSMUA_Achr10P... | Banana | cytosol | 45.16 | 61.09 |
| KRH20845 | Soybean | endoplasmic reticulum | 58.6 | 59.56 |
| PGSC0003DMT400017733 | Potato | extracellular | 58.06 | 58.7 |
| KRH27500 | Soybean | endoplasmic reticulum, extracellular | 56.99 | 58.08 |
| AT3G20820.1 | Thale cress | extracellular | 55.91 | 56.99 |
| Os08t0505900-01 | Rice | extracellular | 56.99 | 55.79 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 54.84 | 54.84 |
| KRH12883 | Soybean | cytosol | 23.39 | 54.72 |
| AT5G12940.1 | Thale cress | extracellular | 53.76 | 53.91 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 54.03 | 52.89 |
| Zm00001d031434_P001 | Maize | extracellular | 54.03 | 52.76 |
| EES14271 | Sorghum | cytosol | 56.45 | 52.37 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 53.23 | 52.11 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 53.23 | 52.11 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 53.76 | 51.55 |
| HORVU7Hr1G050140.1 | Barley | plastid | 53.76 | 51.28 |
| KRG91824 | Soybean | extracellular | 33.06 | 51.25 |
| AT5G06870.1 | Thale cress | extracellular | 30.65 | 34.55 |
| AT5G06860.1 | Thale cress | extracellular | 30.38 | 34.24 |
| AT3G12145.1 | Thale cress | extracellular | 29.3 | 33.54 |
| AT1G33600.1 | Thale cress | extracellular | 32.53 | 25.31 |
| AT2G26380.1 | Thale cress | endoplasmic reticulum, extracellular | 31.72 | 24.58 |
| AT1G33612.1 | Thale cress | extracellular | 29.57 | 24.18 |
| AT1G33670.1 | Thale cress | extracellular | 28.49 | 23.3 |
| AT1G33610.1 | Thale cress | extracellular, plasma membrane, vacuole | 29.57 | 23.01 |
| AT5G23400.1 | Thale cress | vacuole | 36.02 | 22.75 |
| AT1G33590.2 | Thale cress | plastid | 29.84 | 21.6 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:820441 | UniProt:A0A178VMS3 | ProteinID:AAG51016.1 | ProteinID:AEE75223.1 |
| ArrayExpress:AT3G12610 | EnsemblPlantsGene:AT3G12610 | RefSeq:AT3G12610 | TAIR:AT3G12610 | RefSeq:AT3G12610-TAIR-G | EnsemblPlants:AT3G12610.1 |
| TAIR:AT3G12610.1 | EMBL:AY057652 | EMBL:AY086931 | ProteinID:BAB02252.1 | EMBL:BT000814 | Symbol:DRT100 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 |
| GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | RefSeq:NP_187867.1 | ProteinID:OAP06403.1 | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR44401 | UniProt:Q00874 |
| SUPFAM:SSF52058 | SignalP:SignalP-noTM | UniParc:UPI0000001421 | EMBL:X66482 | : | : |
Description
DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
Coordinates
chr3:-:4006346..4008018
Molecular Weight (calculated)
39558.5 Da
IEP (calculated)
4.690
GRAVY (calculated)
0.101
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.