Factsheet for AT1G33670.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G33612.1	Thale cress	extracellular	64.84	64.84
AT1G33610.1	Thale cress	extracellular, plasma membrane, vacuole	65.93	62.76
AT1G33600.1	Thale cress	extracellular	64.4	61.3
AT1G33590.2	Thale cress	plastid	69.01	61.09
AT2G26380.1	Thale cress	endoplasmic reticulum, extracellular	64.4	61.04
CDY38783	Canola	extracellular	54.73	60.73
CDY11623	Canola	extracellular	54.73	59.57
Bra016239.1-P	Field mustard	cytosol	33.19	58.53
PGSC0003DMT400043544	Potato	extracellular	56.7	53.97
Solyc10g052880.1.1	Tomato	extracellular	55.16	52.51
KRH56366	Soybean	nucleus	55.6	51.74
AT3G12145.1	Thale cress	extracellular	22.42	31.38
AT5G12940.1	Thale cress	extracellular	23.3	28.57
AT3G12610.1	Thale cress	extracellular	23.3	28.49
AT5G06860.1	Thale cress	extracellular	20.66	28.48
AT3G20820.1	Thale cress	extracellular	22.64	28.22
AT5G06870.1	Thale cress	extracellular	20.44	28.18
VIT_18s0089g00010.t01	Wine grape	plasma membrane	57.14	27.23
AT5G23400.1	Thale cress	vacuole	35.16	27.16

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:840258	ProteinID:AEE31612.1	ArrayExpress:AT1G33670	EnsemblPlantsGene:AT1G33670
RefSeq:AT1G33670	TAIR:AT1G33670	RefSeq:AT1G33670-TAIR-G	EnsemblPlants:AT1G33670.1	TAIR:AT1G33670.1	Unigene:At.51908
EMBL:DQ056476	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	RefSeq:NP_174628.1	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PANTHER:PTHR45271	UniProt:Q4PT10	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	UniParc:UPI0000048329	:	:	:	:

Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q4PT10]

Coordinates

chr1:+:12201963..12203408

Molecular Weight (calculated)

50431.5 Da

IEP (calculated)

9.000

GRAVY (calculated)

0.128

Length

455 amino acids

Sequence
(BLAST)

001: MNSCSFPLFL FVIFLRCLSS TGAATCHPDD KAGLLAFKSG ITQDPSGILS SWQKDIDCCS WYGIFCLPTI HGDRVTMMAL DGNTDVGETF LSGTISPLLA
101: KLHHLNEIRL TNLRKITGSF PHFLFKLPKL RTVYLENNRL SGPLPANIGA LSNLEILSVA GNRFSGSIPS SMSKLTSLLQ LKLNGNRLSG IFPDIFKSMR
201: QLRFLDLSSN RFSGNLPSSI ASLAPTLSTL EVGHNKLSGT IPDYLSRFEL LSALNLSRNG YTGVVPMSFA NLTNIIFLDL SHNLLTGPFP VLNSLGIEYL
301: HLSYNRFHLE TIPEWVTLSK FIYSLKLAKC GIKMSLDHWM PADTSFYHHI DFSENEISGS PIRFFNQMDF MVEFHAPGNK LQFDLGKLKF GIFLKTLDLS
401: RNLVFGKVPV TVTRLQTLNL SQNHLCGKLP STKFPASAFV DNKCLCGFPL SPCKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.