Factsheet for GSMUA_Achr3P03820_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01520_001	Banana	cytosol	63.17	85.45
GSMUA_Achr10P...	Banana	cytosol	62.37	84.36
Solyc01g086920.2.1	Tomato	nucleus	28.76	65.24
VIT_13s0064g01260.t01	Wine grape	extracellular	61.56	64.33
VIT_06s0004g01750.t01	Wine grape	extracellular	61.56	62.91
KRH43480	Soybean	nucleus	59.14	61.45
KRH23157	Soybean	nucleus	60.75	61.41
Os08t0505900-01	Rice	extracellular	61.56	60.26
CDY60388	Canola	extracellular	58.33	59.45
PGSC0003DMT400017733	Potato	extracellular	58.6	59.24
Bra035741.1-P	Field mustard	extracellular	58.06	59.18
CDY27559	Canola	extracellular	58.06	59.18
CDY19601	Canola	extracellular	58.06	59.18
AT3G20820.1	Thale cress	extracellular	57.53	58.63
CDY06385	Canola	extracellular	57.53	58.63
PGSC0003DMT400003166	Potato	extracellular, vacuole	57.26	58.52
Solyc11g056680.1.1	Tomato	extracellular	56.72	57.97
KRH20845	Soybean	endoplasmic reticulum	56.99	57.92
KRH27500	Soybean	endoplasmic reticulum, extracellular	55.91	56.99
TraesCS7D01G243300.1	Wheat	extracellular	58.06	56.84
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.8	56.58
TraesCS7B01G146800.1	Wheat	extracellular	57.8	56.58
HORVU7Hr1G050110.1	Barley	vacuole	58.6	56.19
CDY50534	Canola	extracellular, vacuole	56.18	56.03
CDY52664	Canola	extracellular	56.18	56.03
HORVU7Hr1G050140.1	Barley	plastid	58.6	55.9
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	55.91	55.76
Bra023925.1-P	Field mustard	extracellular	56.18	55.59
AT3G12610.1	Thale cress	extracellular	54.84	54.84
Zm00001d031434_P001	Maize	extracellular	55.65	54.33
EES14271	Sorghum	cytosol	58.33	54.11
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	54.03	54.03
CDY00787	Canola	endoplasmic reticulum, extracellular, vacuole	54.03	54.03
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	53.76	53.76
KRH12883	Soybean	cytosol	22.85	53.46
KRH24680	Soybean	extracellular	52.15	53.15
AT5G12940.1	Thale cress	extracellular	52.96	53.1
CDX85681	Canola	extracellular	48.12	51.88
Bra008869.1-P	Field mustard	extracellular, plasma membrane	52.15	51.87
CDY68308	Canola	extracellular	52.15	51.87
CDY69775	Canola	extracellular, plasma membrane	52.42	51.72
CDY69275	Canola	extracellular	51.61	51.34
Bra023383.1-P	Field mustard	extracellular	47.85	51.3
CDX91155	Canola	extracellular	47.58	51.16
Bra008870.1-P	Field mustard	extracellular	50.54	50.4
KRH29680	Soybean	endoplasmic reticulum	51.88	49.87
CDY53975	Canola	extracellular	50.0	49.87
KRH24681	Soybean	extracellular	45.7	47.89
KRG91824	Soybean	extracellular	30.65	47.5
GSMUA_Achr1P06920_001	Banana	plastid	20.7	34.22
GSMUA_Achr9P12430_001	Banana	extracellular	27.15	33.44
GSMUA_Achr6P22250_001	Banana	extracellular	29.03	32.93
GSMUA_AchrUn_...	Banana	cytosol	20.43	22.89

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03820_001	EnsemblPlants:GSMUA_Achr3T03820_001	EnsemblPlantsGene:GSMUA_Achr3G03820_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44401	PANTHER:PTHR44401:SF2	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI0002963C30	UniProt:M0SBK0	MapMan:35.1	:

Description

DNA-damage-repair/toleration protein DRT100 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03820_001]

Coordinates

chr3:+:2478553..2479823

Molecular Weight (calculated)

39567.8 Da

IEP (calculated)

7.691

GRAVY (calculated)

0.163

Length

372 amino acids

Sequence
(BLAST)

001: MAPHLLSFVL VLVVIAAAAC VRGSSGCPTL DRDALLAFRS ALSEKRLGIF SSWTGDDCCS QWFGVSCDPT TGRVAGISLR DESEDRIISR SGRSRGLMYG
101: RISPEICRLD RLTTLILADW KQISGPIPPC LTSLSFLSIL DLVGNRLSGP IPNDIGNLSR LTVLNVANNQ ISGSIPTSIL ALSSLMHLDL SNNQISGPIP
201: GDFGNLRMLS RAMLSRNRIS GSIPSSVGHM TRLADLDLAH NRISGEIPGS LGSVPVLSSL YLDSNRLTGQ IPTALFSSRG LGILNLSRNA VEGEIPDVFG
301: SHSYYTALDL SYNQLRGPVP KTLVTAAFVG HLGLSHNHLC GHIPTGSPFD HLEAASFANN DCLCGGPLPV CK

Best Arabidopsis Sequence Match ( AT3G20820.1 )
(BLAST)

001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.