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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031434_P001 Maize extracellular 81.05 85.3
Os08t0505900-01 Rice extracellular 71.82 75.79
TraesCS7D01G243300.1 Wheat extracellular 68.58 72.37
TraesCS7A01G244600.1 Wheat endoplasmic reticulum, extracellular, vacuole 68.58 72.37
TraesCS7B01G146800.1 Wheat extracellular 68.33 72.11
HORVU7Hr1G050110.1 Barley vacuole 68.58 70.88
HORVU7Hr1G050140.1 Barley plastid 68.58 70.51
GSMUA_Achr4P01520_001 Banana cytosol 45.39 66.18
GSMUA_Achr10P... Banana cytosol 43.89 64.0
GSMUA_Achr3P03820_001 Banana endoplasmic reticulum, extracellular 54.11 58.33
KRH43480 Soybean nucleus 51.87 58.1
Solyc01g086920.2.1 Tomato nucleus 23.44 57.32
PGSC0003DMT400003166 Potato extracellular, vacuole 51.37 56.59
VIT_13s0064g01260.t01 Wine grape extracellular 50.12 56.46
AT3G12610.1 Thale cress extracellular 52.37 56.45
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 52.37 56.45
Bra001460.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 52.37 56.45
CDY50534 Canola extracellular, vacuole 52.37 56.3
Bra038737.1-P Field mustard endoplasmic reticulum, extracellular 52.37 56.3
Solyc11g056680.1.1 Tomato extracellular 50.87 56.04
CDY52664 Canola extracellular 52.12 56.03
PGSC0003DMT400017733 Potato extracellular 51.37 55.98
KRH23157 Soybean nucleus 51.37 55.98
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 51.87 55.91
VIT_06s0004g01750.t01 Wine grape extracellular 50.62 55.77
KRH27500 Soybean endoplasmic reticulum, extracellular 50.37 55.34
KRH20845 Soybean endoplasmic reticulum 50.37 55.19
CDY19601 Canola extracellular 49.63 54.52
Bra035741.1-P Field mustard extracellular 49.63 54.52
AT3G20820.1 Thale cress extracellular 49.38 54.25
CDY06385 Canola extracellular 49.13 53.97
CDY60388 Canola extracellular 49.13 53.97
CDX85681 Canola extracellular 46.13 53.62
CDX91155 Canola extracellular 45.89 53.18
CDY27559 Canola extracellular 48.38 53.15
Bra023383.1-P Field mustard extracellular 45.89 53.03
AT5G12940.1 Thale cress extracellular 48.38 52.29
Bra008869.1-P Field mustard extracellular, plasma membrane 48.13 51.6
CDY68308 Canola extracellular 47.88 51.34
CDY69775 Canola extracellular, plasma membrane 47.38 50.4
KRH12883 Soybean cytosol 19.95 50.31
Bra023925.1-P Field mustard extracellular 46.63 49.73
CDY53975 Canola extracellular 46.13 49.6
Bra008870.1-P Field mustard extracellular 45.89 49.33
KRH24680 Soybean extracellular 44.89 49.32
CDY69275 Canola extracellular 45.64 48.93
KRG91824 Soybean extracellular 28.18 47.08
KRH29680 Soybean endoplasmic reticulum 45.39 47.03
KRH24681 Soybean extracellular 40.65 45.92
EES17528 Sorghum extracellular 30.92 36.58
EER99569 Sorghum extracellular 28.43 34.23
EER94664 Sorghum extracellular 23.94 34.04
EER99094 Sorghum mitochondrion, vacuole 28.93 33.05
EES17529 Sorghum extracellular 27.93 32.84
OQU81782 Sorghum extracellular 25.94 30.23
EES17527 Sorghum extracellular, plastid 27.68 28.24
KXG27431 Sorghum vacuole 36.41 27.86
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1UniProt:C5YIS8EnsemblPlants:EES14271ProteinID:EES14271ProteinID:EES14271.2
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF08263PFAM:PF13855PRINTS:PR00019
PANTHER:PTHR44401SMART:SM00369EnsemblPlantsGene:SORBI_3007G211400SUPFAM:SSF52058unigene:Sbi.21528SignalP:SignalP-noTM
UniParc:UPI00081AE462SEG:seg::::
Description
hypothetical protein
Coordinates
chr7:+:64037497..64040008
Molecular Weight (calculated)
41282.0 Da
IEP (calculated)
8.429
GRAVY (calculated)
0.143
Length
401 amino acids
Sequence
(BLAST)
001: MLATDEHCRP LPPKPQSKAK HAMASPGTAA ALLVVLAALL APPPAACACS AADRDALLSI RAALSEERRL GVFSTWTGTD CCAGWYGVAC DPTTGRVADL
101: SLRGEADDAV MAPAGRPASG VMSGYVSDAV CRLDRLSSLV LADWKQISGP VPACVATSLP YLRILELPGN RLTGAIPPLA ALSRLAVLNL ADNQLTGGIP
201: GSVTSLAELK HLDLANNRLT GRLPSDFGKL RMLSRALLGR NRLSGPIPAS VASMPRLADL DLSENQLTGA IPEGLGRGSG NGGNVLTSLY LGGNRLSGGV
301: PASLLANSGL GMLNLSRNAL GGGIPDAFTP RSYFMLLDLS RNRLTGGVPR SLSLAAYVGH LDLSHNRLCG SIPAGPPFDH LDAQSFASNS CLCGGPLGKC
401: T
Best Arabidopsis Sequence Match ( AT3G12610.1 )
(BLAST)
001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC
Arabidopsis Description
DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.