Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003317_P001 | Maize | extracellular | 86.05 | 88.1 |
| TraesCS2B01G353300.1 | Wheat | extracellular | 60.17 | 63.11 |
| HORVU2Hr1G082160.1 | Barley | cytosol | 56.69 | 62.7 |
| HORVU2Hr1G082140.1 | Barley | extracellular | 59.3 | 62.01 |
| EER99094 | Sorghum | mitochondrion, vacuole | 41.86 | 41.03 |
| EES17528 | Sorghum | extracellular | 39.53 | 40.12 |
| EES17529 | Sorghum | extracellular | 38.66 | 39.0 |
| EER99569 | Sorghum | extracellular | 37.21 | 38.44 |
| EER94664 | Sorghum | extracellular | 30.23 | 36.88 |
| EES17527 | Sorghum | extracellular, plastid | 38.08 | 33.33 |
| EES14271 | Sorghum | cytosol | 30.23 | 25.94 |
| KXG27431 | Sorghum | vacuole | 28.78 | 18.89 |
Protein Annotations
| EnsemblPlants:OQU81782 | EnsemblPlantsGene:SORBI_3006G117500 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44138 |
| PANTHER:PTHR44138:SF3 | ProteinID:OQU81782 | ProteinID:OQU81782.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 |
| UniParc:UPI000B8BA7E9 | UniProt:A0A1Z5RDG7 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:48520796..48522032
Molecular Weight (calculated)
38009.4 Da
IEP (calculated)
8.920
GRAVY (calculated)
0.045
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNTRPRGAM ASRTAALLLF FLLSFQLITT SLSQSQLSSQ DLPALIKIRE QLGNPDALAG WRPGTLCWAW WPAACNEQGR VTKLFLERPI NITSALPPAI
101: GLLDQLETLS ILEMPGLHGP IPDSFCNLSH LSIFNLMVTS VSGPIPACLY RTNLTSVSFY RSKLNGTIPR SLWKLPYFTS FDAAYNDLVG PIPPLLVHGG
201: KPDRPLVLML DGNRLTGTIP WTFALERHML EFRVANNKLT GDPSFLFGRR KVVTGTIDLS GNNFRFNLTG VEMPMQLSFL NLSHNRIYGG VPVSLRDTRV
301: SILDLSYNDL CGEIPTGGHM VQFKAAAYEH NKCLCGTPLP PCRN
101: GLLDQLETLS ILEMPGLHGP IPDSFCNLSH LSIFNLMVTS VSGPIPACLY RTNLTSVSFY RSKLNGTIPR SLWKLPYFTS FDAAYNDLVG PIPPLLVHGG
201: KPDRPLVLML DGNRLTGTIP WTFALERHML EFRVANNKLT GDPSFLFGRR KVVTGTIDLS GNNFRFNLTG VEMPMQLSFL NLSHNRIYGG VPVSLRDTRV
301: SILDLSYNDL CGEIPTGGHM VQFKAAAYEH NKCLCGTPLP PCRN
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.