CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G459300.1	Wheat	cytosol	33.63	77.03
EES17529	Sorghum	extracellular	75.52	75.07
TraesCS3A01G459200.1	Wheat	extracellular	72.27	72.06
TraesCS3D01G451800.1	Wheat	extracellular	71.68	71.47
TraesCS3B01G498900.1	Wheat	extracellular	70.8	70.59
TraesCS3D01G451400.1	Wheat	extracellular	69.32	69.32
TraesCS3D01G451900.1	Wheat	extracellular	69.32	69.32
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	71.09	67.51
TraesCS3A01G459000.1	Wheat	extracellular	66.08	65.69
TraesCS3D01G451500.1	Wheat	extracellular	64.01	64.97
HORVU3Hr1G098610.1	Barley	extracellular	64.01	64.58
TraesCS7D01G200000.1	Wheat	cytosol	57.82	62.62
TraesCS7B01G103900.1	Wheat	extracellular	59.88	60.24
EES17527	Sorghum	extracellular, plastid	64.31	55.47
Bra005918.1-P	Field mustard	extracellular	28.91	47.8
TraesCS7A01G197500.1	Wheat	extracellular	25.07	46.45
Bra009234.1-P	Field mustard	extracellular	45.13	46.22
Bra009237.1-P	Field mustard	extracellular	45.72	46.13
CDX70057	Canola	extracellular	45.72	46.13
CDX98967	Canola	extracellular	45.72	46.13
CDX70060	Canola	extracellular	45.13	46.08
GSMUA_Achr9P12430_001	Banana	extracellular	41.0	46.03
CDX98965	Canola	extracellular	44.84	45.78
CDX70058	Canola	extracellular	44.84	45.51
KRG95348	Soybean	mitochondrion	46.61	45.01
CDX98966	Canola	extracellular	44.25	44.91
Bra009236.1-P	Field mustard	extracellular	44.25	44.91
AT5G06870.1	Thale cress	extracellular	43.66	44.85
AT5G06860.1	Thale cress	extracellular	43.36	44.55
CDX70059	Canola	extracellular	43.66	44.31
CDY58887	Canola	extracellular	43.07	44.24
CDY58884	Canola	extracellular	43.07	44.11
Bra009235.1-P	Field mustard	extracellular	43.36	44.01
Bra005919.1-P	Field mustard	extracellular	42.77	43.81
Bra009238.1-P	Field mustard	extracellular	42.77	43.67
VIT_13s0064g01370.t01	Wine grape	extracellular	42.48	43.37
EER94664	Sorghum	extracellular	35.99	43.26
KRH12977	Soybean	nucleus	42.77	42.77
CDX81023	Canola	extracellular	42.48	42.11
Bra005917.1-P	Field mustard	extracellular	42.18	41.81
CDY58888	Canola	extracellular	42.18	41.81
Solyc09g014480.1.1	Tomato	extracellular	41.3	41.79
Solyc09g014590.2.1	Tomato	extracellular	38.05	41.35
EER99569	Sorghum	extracellular	40.41	41.14
PGSC0003DMT400021883	Potato	extracellular	40.41	41.02
Bra005916.1-P	Field mustard	extracellular	41.59	40.63
KRH12976	Soybean	cytosol	44.25	40.32
CDY58889	Canola	extracellular	41.0	40.06
EER99094	Sorghum	mitochondrion, vacuole	41.0	39.6
OQU81782	Sorghum	extracellular	40.12	39.53
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	43.07	37.92
CDX70056	Canola	extracellular	42.77	35.8
EES14271	Sorghum	cytosol	36.58	30.92
CDX81022	Canola	extracellular, plasma membrane	35.99	24.11
KXG27431	Sorghum	vacuole	33.63	21.76

Protein Annotations

EnsemblPlants:EES17528	EnsemblPlantsGene:SORBI_3009G002500	EntrezGene:8065283	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	PANTHER:PTHR44138	PFAM:PF08263	ProteinID:EES17528	ProteinID:EES17528.2	RefSeq:XP_002439098.1
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000B8BAD8D	UniProt:C5YXZ3	MapMan:26.8.3.4

Description

hypothetical protein

Coordinates

chr9:+:214288..215356

Molecular Weight (calculated)

35744.8 Da

IEP (calculated)

7.272

GRAVY (calculated)

0.183

Length

339 amino acids

Sequence
(BLAST)

001: MRKYSLVVVL LAAAAASASA SAAAASSSKA DRCHSDDKRA LLAIKAALGN PYHFASWTPD NPCCDWYDVD FDATNGRVVG LSIFQDANLT GTIPDAIAGL
101: VHLRNLMLHH LPGISGPIPP AIATLSNLST LTISYTGVSG PVPSFLGKLT ALTLLDLPFN SLTGAIPPSL AALPYLSGID LSRNRLTGAI PPLLLSRSPD
201: QAYLVLSHNN LSGAIPAEFA AVNFAHLDLS RNALTGGDAS GLFGRGKELQ YLDLSRNALS FNLSGVELPE QLYFVDVSHN AIYGGIPAQV ANLTNLHFFN
301: VSYNRLCGGV PTGGNMARLD AYNYQHNKCL CGTPLPTCK

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.