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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009238.1-P Field mustard extracellular 81.98 100.0
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 88.89 93.51
CDY58887 Canola extracellular 63.21 77.58
CDY58884 Canola extracellular 62.22 76.13
CDY58889 Canola extracellular 64.44 75.22
AT5G06870.1 Thale cress extracellular 60.74 74.55
CDY58888 Canola extracellular 62.22 73.68
CDX81023 Canola extracellular 61.73 73.1
CDX98965 Canola extracellular 59.26 72.29
CDX70060 Canola extracellular 59.01 71.99
CDX70058 Canola extracellular 58.52 70.96
CDX98966 Canola extracellular 57.53 69.76
CDX70059 Canola extracellular 57.28 69.46
CDX70057 Canola extracellular 57.04 68.75
CDX98967 Canola extracellular 56.79 68.45
KRH12977 Soybean nucleus 47.41 56.64
PGSC0003DMT400057136 Potato extracellular 45.19 55.79
Solyc07g065090.1.1 Tomato extracellular 44.94 55.66
VIT_08s0007g07690.t01 Wine grape extracellular 46.91 55.23
CDY52623 Canola extracellular, vacuole 42.22 52.62
KRG95348 Soybean mitochondrion 45.43 52.42
CDY50569 Canola extracellular, vacuole 41.98 52.31
TraesCS3A01G459300.1 Wheat cytosol 18.52 50.68
CDY05006 Canola extracellular 40.49 50.62
CDY42131 Canola extracellular 39.51 49.54
CDY42127 Canola extracellular 39.75 49.39
CDY42130 Canola extracellular 39.75 49.24
CDY08448 Canola extracellular 39.51 48.93
CDX81022 Canola extracellular, plasma membrane 60.99 48.81
CDY08451 Canola endoplasmic reticulum, extracellular 39.26 48.77
KRH12976 Soybean cytosol 44.44 48.39
CDY14065 Canola extracellular 38.52 48.15
GSMUA_Achr9P12430_001 Banana extracellular 35.56 47.68
CDY08450 Canola extracellular 37.78 47.37
CDY42129 Canola cytosol 37.28 46.6
TraesCS3A01G459200.1 Wheat extracellular 37.78 45.0
TraesCS3D01G451800.1 Wheat extracellular 37.53 44.71
TraesCS3D01G451400.1 Wheat extracellular 37.04 44.25
TraesCS3B01G498900.1 Wheat extracellular 36.79 43.82
TraesCS3D01G451500.1 Wheat extracellular 35.8 43.41
Zm00001d035753_P001 Maize extracellular 36.54 43.4
TraesCS3D01G451900.1 Wheat extracellular 36.3 43.36
HORVU3Hr1G098610.1 Barley extracellular 35.8 43.15
EES17528 Sorghum extracellular 35.8 42.77
HORVU3Hr1G098730.2 Barley endoplasmic reticulum, extracellular, mitochondrion 37.53 42.58
TraesCS3A01G459000.1 Wheat extracellular 35.8 42.52
Os05t0104200-01 Rice extracellular 32.35 42.39
EES17529 Sorghum extracellular 35.31 41.94
TraesCS7D01G200000.1 Wheat cytosol 32.35 41.85
Os05t0104150-01 Rice extracellular 34.57 40.94
TraesCS1A01G012600.1 Wheat extracellular 33.83 40.77
TraesCS1D01G010800.1 Wheat extracellular 33.83 40.65
Os05t0104600-01 Rice extracellular 33.58 40.12
TraesCS1B01G017300.1 Wheat extracellular 32.84 39.47
Zm00001d035756_P001 Maize vacuole 33.58 38.86
TraesCS7B01G103900.1 Wheat extracellular 32.1 38.58
TraesCS2D01G470400.1 Wheat extracellular 31.85 37.72
TraesCS2A01G470500.1 Wheat extracellular 31.6 37.43
TraesCS2B01G493300.1 Wheat extracellular 31.36 36.81
TraesCS2D01G470500.1 Wheat extracellular, vacuole 31.11 36.73
HORVU1Hr1G002410.1 Barley endoplasmic reticulum, vacuole 33.33 36.68
HORVU2Hr1G106620.1 Barley extracellular 30.62 36.47
TraesCS2B01G493200.1 Wheat endoplasmic reticulum, extracellular 30.37 35.96
TraesCS2A01G470600.1 Wheat extracellular 29.14 34.91
EES17527 Sorghum extracellular, plastid 33.58 34.61
Os05t0104700-01 Rice extracellular 33.83 34.16
CDY52664 Canola extracellular 25.68 27.88
CDY60388 Canola extracellular 24.94 27.67
CDY19601 Canola extracellular 24.94 27.67
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 25.19 27.42
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 25.19 27.42
CDY50534 Canola extracellular, vacuole 25.19 27.35
CDY27559 Canola extracellular 24.44 27.12
CDY06385 Canola extracellular 24.44 27.12
CDX85681 Canola extracellular 22.72 26.67
CDX91155 Canola extracellular 22.72 26.59
TraesCS7A01G197500.1 Wheat extracellular 11.85 26.23
CDY53975 Canola extracellular 23.21 25.2
CDY68308 Canola extracellular 23.21 25.13
CDY69775 Canola extracellular, plasma membrane 23.21 24.93
CDY69275 Canola extracellular 22.22 24.06
CDY38783 Canola extracellular 21.48 21.22
CDY15279 Canola plastid 22.22 21.13
CDY40923 Canola extracellular, vacuole 24.44 21.11
CDY11623 Canola extracellular 21.23 20.57
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 7.65 19.02
CDX93758 Canola plastid 11.85 18.68
CDX88024 Canola extracellular, vacuole 26.91 18.57
CDX80361 Canola extracellular, vacuole 26.67 18.4
CDY64876 Canola extracellular, vacuole 26.42 18.35
CDY16850 Canola plastid 20.49 16.77
Protein Annotations
EnsemblPlants:CDX70056EnsemblPlantsGene:GSBRNA2T00136156001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44138
PFAM:PF08263PFAM:PF13855PFscan:PS51450PRINTS:PR00019ProteinID:CDX70056ProteinID:CDX70056.1
SEG:segSignalP:SignalP-noTMSUPFAM:SSF52058UniParc:UPI0004EEC0D2MapMan:26.8.3.4:
Description
BnaA10g24050D
Coordinates
chrLK031790:-:2905642..2907502
Molecular Weight (calculated)
45949.0 Da
IEP (calculated)
9.479
GRAVY (calculated)
-0.127
Length
405 amino acids
Sequence
(BLAST)
001: MSKATTLLLF LFFTLLLTTS LSKDLCHKDD KNTLLKIKKS LSNPYNNIIS WDPKEDCCTW FNVECGDATV NHRVTSLHIS YDQISAQIPP EVGDLPYLQT
101: LIFRKLSNLT GPIQPTIAKL KYLRFLRLSW TNLTGPIPDF FSQLKNLQYI DLSYNDLSGS IPTSLALLPK LEYLELSRNK LTGPIPELFR SFPGKAPDLF
201: LSHNQLNGSI PKSLGKLDFY RIDLSHNKLK GDASMLFGTN KKTWTIDLSR NMFQFDISKV KVAKTVNLLD LNHNGITGSI PVQWTELSLQ SFNVSYNRLC
301: GPIPKGGQLQ RDGAYAYLHN KCLCGAPLQR CKDITFLFNK KDFESMPEKA LLKTVDPYLD LIITRRDVTN SAQYLMISGV EIVAHVLFFQ LCNHRISHII
401: KVPRA
Best Arabidopsis Sequence Match ( AT5G06870.1 )
(BLAST)
001: MDKTMTLFLL LSTLLLTTSL AKDLCHKDDK TTLLKIKKSL NNPYHLASWD PKTDCCSWYC LECGDATVNH RVTSLIIQDG EISGQIPPEV GDLPYLTSLI
101: FRKLTNLTGH IQPTIAKLKN LTFLRLSWTN LTGPVPEFLS QLKNLEYIDL SFNDLSGSIP SSLSSLRKLE YLELSRNKLT GPIPESFGTF SGKVPSLFLS
201: HNQLSGTIPK SLGNPDFYRI DLSRNKLQGD ASILFGAKKT TWIVDISRNM FQFDLSKVKL AKTLNNLDMN HNGITGSIPA EWSKAYFQLL NVSYNRLCGR
301: IPKGEYIQRF DSYSFFHNKC LCGAPLPSCK
Arabidopsis Description
PGIP2PGIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDM1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.