Factsheet for Os05t0104700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 19038476

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0104600-01	Rice	extracellular	61.6	72.86
Os05t0104200-01	Rice	extracellular	41.65	54.05
TraesCS2D01G470400.1	Wheat	extracellular	43.89	51.46
HORVU2Hr1G106620.1	Barley	extracellular	43.14	50.88
Os05t0104150-01	Rice	extracellular	43.14	50.58
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	43.14	50.58
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	43.14	50.44
TraesCS2A01G470500.1	Wheat	extracellular	42.64	50.0
TraesCS2B01G493300.1	Wheat	extracellular	42.39	49.28
TraesCS2A01G470600.1	Wheat	extracellular	40.15	47.63
Bra005918.1-P	Field mustard	extracellular	23.19	45.37
Bra009237.1-P	Field mustard	extracellular	36.41	43.45
CDX70057	Canola	extracellular	36.41	43.45
CDX70058	Canola	extracellular	36.16	43.41
CDY58887	Canola	extracellular	35.66	43.33
Bra009234.1-P	Field mustard	extracellular	35.66	43.2
CDX70060	Canola	extracellular	35.66	43.07
CDX98967	Canola	extracellular	35.91	42.86
AT5G06860.1	Thale cress	extracellular	35.16	42.73
CDY58884	Canola	extracellular	35.16	42.6
Bra009236.1-P	Field mustard	extracellular	35.41	42.52
CDX98965	Canola	extracellular	35.16	42.47
VIT_13s0064g01370.t01	Wine grape	extracellular	35.16	42.47
Bra005919.1-P	Field mustard	extracellular	34.91	42.3
Os07t0568700-02	Rice	extracellular	34.91	42.17
AT5G06870.1	Thale cress	extracellular	34.16	41.52
Bra009238.1-P	Field mustard	extracellular	34.16	41.27
GSMUA_Achr9P12430_001	Banana	extracellular	30.92	41.06
KRG95348	Soybean	mitochondrion	35.91	41.03
Bra005917.1-P	Field mustard	extracellular	34.91	40.94
CDY58888	Canola	extracellular	34.91	40.94
CDX81023	Canola	extracellular	34.91	40.94
CDX98966	Canola	extracellular	33.92	40.72
Bra005916.1-P	Field mustard	extracellular	35.16	40.63
Bra009235.1-P	Field mustard	extracellular	33.42	40.12
CDX70059	Canola	extracellular	33.42	40.12
CDY58889	Canola	extracellular	34.66	40.06
KRH12977	Soybean	nucleus	33.17	39.23
Os09t0491612-01	Rice	extracellular	31.92	37.43
Solyc09g014480.1.1	Tomato	extracellular	31.17	37.31
Solyc09g014590.2.1	Tomato	extracellular	28.68	36.86
PGSC0003DMT400021883	Potato	extracellular	30.42	36.53
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	34.66	36.1
KRH12976	Soybean	cytosol	33.17	35.75
CDX70056	Canola	extracellular	34.16	33.83
Os03t0436600-00	Rice	endoplasmic reticulum	25.69	31.31
Os08t0505900-01	Rice	extracellular	28.18	29.74
CDX81022	Canola	extracellular, plasma membrane	31.67	25.1
Os04t0677200-01	Rice	cytosol, peroxisome	18.95	17.39
Os05t0104650-00	Rice	plasma membrane	18.95	5.37

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	ProteinID:AAU44163.1	ProteinID:AAW56934.1	EMBL:AK108676	ProteinID:BAF16318.1
ProteinID:BAS91858.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004642	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006139	GO:GO:0006189	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os05g0104700	EnsemblPlants:Os05t0104700-01	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	PANTHER:PTHR44138	UniProt:Q65XJ2	SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI000043F41C
SEG:seg	:	:	:	:	:

Description

POLYGALACTURONASE-INHIBITING PROTEIN 4Leucine-rich repeat (LRR) protein, Inhibitor of fungal polygalacturonase, Defence response (Os05t0104700-01)

Coordinates

chr5:+:256779..258418

Molecular Weight (calculated)

43179.3 Da

IEP (calculated)

8.629

GRAVY (calculated)

0.149

Length

401 amino acids

Sequence
(BLAST)

001: MRRLIVLFKA VGAKLLPSEQ LANLITPSPS TYIYPHTHIV QDKLRQNRSE VEMVRAIGPL LLLAHVLVFV VSIAAAAAPV RRPRCDAGDR AALLAVKAAF
101: NNASYFQSWT PDIACCHWYG VDCGGDDYDY DPTDGDRVLS LAIIRDDNVT GGIPGDAIAR LTRLQELMFF KVPGVTGPIP AALATLTALR ELTISRTALS
201: GSIPSFIGDK FTALQSLDLS FNSLTGAIPA SLAKPPKLIS IDLSRNQLTG SIPRLLLSKA GQQAFLTLSH NNLSGRIPAA FGAVNFVQID LSRNQLTGDA
301: SMLFGSGKKE LGSVYLSRNA LSFDMSELRL PERLSFLDVS HNAIRGGIPA QVANLSNLQL LNVSYNRMCG EVPTGGNMAR FDAYCFQHNK CLCGAPLAAC
401: H

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.