Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94664 | Sorghum | extracellular | 69.6 | 81.21 |
| Zm00001d029583_P001 | Maize | extracellular | 66.57 | 77.11 |
| TraesCS7A01G189800.1 | Wheat | endoplasmic reticulum, extracellular | 64.13 | 74.82 |
| TraesCS7D01G190900.1 | Wheat | extracellular | 63.53 | 73.33 |
| HORVU7Hr1G038570.1 | Barley | mitochondrion | 64.13 | 70.33 |
| TraesCS7B01G094700.1 | Wheat | plastid | 65.05 | 61.85 |
| Os05t0104200-01 | Rice | extracellular | 32.52 | 34.63 |
| Os05t0104150-01 | Rice | extracellular | 33.13 | 31.87 |
| Os09t0491612-01 | Rice | extracellular | 32.52 | 31.29 |
| Os07t0568700-02 | Rice | extracellular | 31.0 | 30.72 |
| Os05t0104600-01 | Rice | extracellular | 31.61 | 30.68 |
| Os08t0505900-01 | Rice | extracellular | 31.31 | 27.11 |
| Os05t0104700-01 | Rice | extracellular | 31.31 | 25.69 |
| Os04t0677200-01 | Rice | cytosol, peroxisome | 19.76 | 14.87 |
| Os05t0104650-00 | Rice | plasma membrane | 20.67 | 4.81 |
Protein Annotations
| EnsemblPlants:Os03t0436600-00 | EnsemblPlantsGene:Os03g0436600 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PANTHER:PTHR44138:SF1 | PFAM:PF08263 | ProteinID:BAS84846.1 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF52058 | UniParc:UPI000393BA87 | UniProt:A0A0P0VZ45 | MapMan:35.1 | : | : |
Description
Similar to polygalacturonase inhibitor 1. (Os03t0436600-00)
Coordinates
chr3:+:18410063..18411482
Molecular Weight (calculated)
34796.4 Da
IEP (calculated)
8.287
GRAVY (calculated)
0.277
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSNPFCHT MAILLAVLLV AAAATTEADG ALCDKSDKAA LLAVKSALGN PPALSVWNSS TPCCSWDGVS CDAITGRVTE LTVFALNISA PVPAAIANLT
101: KLQILNLAYN QLYGPFPSFL GPRALPDLTF LRLDGNRLSG AIPPTATVFN LLLEGNLLTG TLPSTFGAAA FGEVGVAGNQ LSCSHSKHVS HVLARILCCH
201: TLLPCAKPIQ TKCIHSKDKI IANSCDASML FGAKKKLNAL RLSRNRFAFD LGSVELPEGL DILVIDHNMV YGSIPPAAAA AGRKWLAFDV SYNQLCGPIP
301: QGRYTHRFGA KHFAGNKCLC DRPLPPCSS
101: KLQILNLAYN QLYGPFPSFL GPRALPDLTF LRLDGNRLSG AIPPTATVFN LLLEGNLLTG TLPSTFGAAA FGEVGVAGNQ LSCSHSKHVS HVLARILCCH
201: TLLPCAKPIQ TKCIHSKDKI IANSCDASML FGAKKKLNAL RLSRNRFAFD LGSVELPEGL DILVIDHNMV YGSIPPAAAA AGRKWLAFDV SYNQLCGPIP
301: QGRYTHRFGA KHFAGNKCLC DRPLPPCSS
001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
Arabidopsis Description
PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.