Factsheet for Os05t0104200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 17951457
extracellular: 18372294
extracellular: 19226311
extracellular: 24083427
extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 17951457 doi

J Zhu, S Alvarez, EL Marsh, ME Lenoble, IJ Cho, M Sivaguru, S Chen, HT Nguyen, Y Wu, DP Schachtman, RE Sharp

Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035753_P001	Maize	extracellular	68.28	61.88
EES17529	Sorghum	extracellular	65.7	59.53
Os05t0104150-01	Rice	extracellular	57.61	52.05
GSMUA_Achr9P12430_001	Banana	extracellular	46.28	47.35
Os05t0104600-01	Rice	extracellular	51.46	46.9
Bra009234.1-P	Field mustard	extracellular	45.31	42.3
CDX70060	Canola	extracellular	45.31	42.17
Bra009237.1-P	Field mustard	extracellular	45.63	41.96
CDX70057	Canola	extracellular	45.63	41.96
Os05t0104700-01	Rice	extracellular	54.05	41.65
CDX98967	Canola	extracellular	44.98	41.37
CDX98965	Canola	extracellular	44.34	41.27
AT5G06860.1	Thale cress	extracellular	44.01	41.21
CDX70058	Canola	extracellular	44.34	41.02
AT5G06870.1	Thale cress	extracellular	43.69	40.91
CDY58887	Canola	extracellular	43.69	40.91
Bra009236.1-P	Field mustard	extracellular	44.01	40.72
CDX98966	Canola	extracellular	43.69	40.42
CDX81023	Canola	extracellular	44.66	40.35
Bra005917.1-P	Field mustard	extracellular	44.66	40.35
CDY58888	Canola	extracellular	44.66	40.35
CDY58884	Canola	extracellular	43.04	40.18
KRG95348	Soybean	mitochondrion	45.31	39.89
CDX70059	Canola	extracellular	43.04	39.82
Bra009235.1-P	Field mustard	extracellular	43.04	39.82
Bra005919.1-P	Field mustard	extracellular	42.39	39.58
Bra009238.1-P	Field mustard	extracellular	42.39	39.46
VIT_13s0064g01370.t01	Wine grape	extracellular	42.07	39.16
Bra005916.1-P	Field mustard	extracellular	43.69	38.9
CDY58889	Canola	extracellular	43.04	38.33
Solyc09g014480.1.1	Tomato	extracellular	41.42	38.21
Bra005918.1-P	Field mustard	extracellular	25.24	38.05
Solyc09g014590.2.1	Tomato	extracellular	37.86	37.5
Os09t0491612-01	Rice	extracellular	41.42	37.43
PGSC0003DMT400021883	Potato	extracellular	40.45	37.43
Os07t0568700-02	Rice	extracellular	40.13	37.35
KRH12977	Soybean	nucleus	40.45	36.87
KRH12976	Soybean	cytosol	43.04	35.75
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	42.72	34.29
Os03t0436600-00	Rice	endoplasmic reticulum	34.63	32.52
CDX70056	Canola	extracellular	42.39	32.35
Os08t0505900-01	Rice	extracellular	36.89	30.0
CDX81022	Canola	extracellular, plasma membrane	37.86	23.12
Os04t0677200-01	Rice	cytosol, peroxisome	24.27	17.16
Os05t0104650-00	Rice	plasma membrane	20.06	4.38

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	EntrezGene:4337549	ProteinID:BAF16316.1	ProteinID:BAS91854.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os05g0104200	EnsemblPlants:Os05t0104200-01	PFAM:PF00560	PFAM:PF08263	PANTHER:PTHR44138
UniProt:Q0DLF7	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI000035850F	RefSeq:XP_015638122.1	SEG:seg

Description

POLYGALACTURONASE-INHIBITING PROTEIN 1, POLYGALACTURONASE-INHIBITING PROTEIN 2Polygalacturonase inhibiting protein, Inhibitor of fungal polygalacturonase, Sheath blight resistance (Os05t0104200-01)

Coordinates

chr5:+:230784..231999

Molecular Weight (calculated)

32755.6 Da

IEP (calculated)

7.405

GRAVY (calculated)

0.183

Length

309 amino acids

Sequence
(BLAST)

001: MRAMVVVLVL AAAGAAAATT KKKECNAGDK AALLAIKKAL GDPYHFASWT PDNLCCEWYD VTCDDTTDRV VGLSVFQDAN LTGTIPDAVA GLTHLRTLTW
101: HHLPQISGPI PPAIAKLNRL SLLIISWTAV SGPVPSFLGG LKSLTLLDLS FNSLTGAIPP SLAALPFLSG IDISRNRLTG PLPPALFSKL NTTQQGGAYL
201: RLSRNNLTGG IPAEYGGVAF EVMDLSRNAL SFDMTGLRLQ EGVSSLDLSH NMLYGGVPAQ VAGLSSLQDF NVSYNRLCGE LPAGAARFDQ YSFFHNKCLC
301: GPPLPTPCN

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.