Factsheet for Bra005918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 10
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58887	Canola	extracellular	92.68	57.58
Bra005919.1-P	Field mustard	extracellular	90.24	55.89
Bra005917.1-P	Field mustard	extracellular	84.88	50.88
TraesCS3A01G459300.1	Wheat	cytosol	35.61	49.32
Bra009238.1-P	Field mustard	extracellular	76.59	47.29
Bra005916.1-P	Field mustard	extracellular	80.0	47.26
Bra009235.1-P	Field mustard	extracellular	71.71	44.01
Bra009234.1-P	Field mustard	extracellular	70.24	43.5
AT5G06870.1	Thale cress	extracellular	69.76	43.33
Bra009236.1-P	Field mustard	extracellular	70.24	43.11
Bra009237.1-P	Field mustard	extracellular	69.76	42.56
KRH12977	Soybean	nucleus	57.07	34.51
VIT_08s0007g07690.t01	Wine grape	extracellular	57.56	34.3
KRG95348	Soybean	mitochondrion	58.05	33.9
Solyc07g065090.1.1	Tomato	extracellular	53.17	33.33
PGSC0003DMT400057136	Potato	extracellular	53.17	33.23
Bra038700.1-P	Field mustard	extracellular, vacuole	47.8	30.15
KRH12976	Soybean	cytosol	54.63	30.11
Bra034774.1-P	Field mustard	extracellular	47.8	30.06
Zm00001d035753_P001	Maize	extracellular	49.76	29.91
TraesCS3A01G459200.1	Wheat	extracellular	49.27	29.71
TraesCS3D01G451800.1	Wheat	extracellular	49.27	29.71
HORVU3Hr1G098610.1	Barley	extracellular	48.29	29.46
Bra034773.1-P	Field mustard	cytosol	44.88	29.21
TraesCS3B01G498900.1	Wheat	extracellular	48.29	29.12
EES17528	Sorghum	extracellular	47.8	28.91
TraesCS3D01G451500.1	Wheat	extracellular	46.83	28.74
TraesCS3D01G451900.1	Wheat	extracellular	46.83	28.32
EES17529	Sorghum	extracellular	46.83	28.15
TraesCS3D01G451400.1	Wheat	extracellular	46.34	28.02
Os05t0104600-01	Rice	extracellular	46.34	28.02
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	48.78	28.01
TraesCS1D01G010800.1	Wheat	extracellular	45.85	27.89
GSMUA_Achr9P12430_001	Banana	extracellular	40.98	27.81
Os05t0104150-01	Rice	extracellular	46.34	27.78
TraesCS1A01G012600.1	Wheat	extracellular	45.37	27.68
TraesCS3A01G459000.1	Wheat	extracellular	45.85	27.57
TraesCS7D01G200000.1	Wheat	cytosol	41.46	27.16
TraesCS1B01G017300.1	Wheat	extracellular	44.39	27.0
Zm00001d035756_P001	Maize	vacuole	45.37	26.57
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	44.39	26.53
TraesCS2A01G470500.1	Wheat	extracellular	43.41	26.02
HORVU2Hr1G106620.1	Barley	extracellular	42.93	25.88
TraesCS7B01G103900.1	Wheat	extracellular	42.44	25.82
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	42.93	25.73
TraesCS2D01G470400.1	Wheat	extracellular	42.93	25.73
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	45.37	25.27
Os05t0104200-01	Rice	extracellular	38.05	25.24
TraesCS2A01G470600.1	Wheat	extracellular	41.46	25.15
TraesCS2B01G493300.1	Wheat	extracellular	41.95	24.93
Os05t0104700-01	Rice	extracellular	45.37	23.19
EES17527	Sorghum	extracellular, plastid	42.93	22.39
Bra023383.1-P	Field mustard	extracellular	34.63	20.46
Bra035741.1-P	Field mustard	extracellular	34.15	19.18
Bra008869.1-P	Field mustard	extracellular, plasma membrane	34.15	18.72
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	33.17	18.28
Bra008870.1-P	Field mustard	extracellular	32.68	17.96
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	32.2	17.69
Bra016239.1-P	Field mustard	cytosol	21.95	17.44
Bra023925.1-P	Field mustard	extracellular	30.73	16.76
Bra026499.1-P	Field mustard	plastid	34.15	14.14
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	31.22	13.36
Bra009680.1-P	Field mustard	extracellular, vacuole	38.05	13.29
Bra010209.1-P	Field mustard	extracellular	30.73	13.18
TraesCS7A01G197500.1	Wheat	extracellular	5.85	6.56

Protein Annotations

EnsemblPlants:Bra005918.1	EnsemblPlants:Bra005918.1-P	EnsemblPlantsGene:Bra005918	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000253F65A	UniProt:M4CNY0
MapMan:26.8.3.4	:	:	:	:	:

Description

AT5G06860 (E=5e-066) PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding

Coordinates

chrA03:+:1217157..1217869

Molecular Weight (calculated)

22776.7 Da

IEP (calculated)

8.488

GRAVY (calculated)

-0.033

Length

205 amino acids

Sequence
(BLAST)

001: MDKTTTLLLL LFALLLTTSL SKDLCHKDDL SGSIPGSLSL LPKLEILDLS RNKLTGSIPE SFGSFKGVMY ALFLSHNQLS GSIPKSLENL DINQIDLSRN
101: KLEGDASMLF GAQKTTHNID LSRNMFQFNI SMVKVSKTVN FLHLNHNGLT GTIPIQWTQL DLQIFNVSYN RLCGRIPQGG ELQRFDAYAY LHNKCLCGAP
201: LQSCK

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.