Factsheet for TraesCS1B01G017300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G010800.1	Wheat	extracellular	91.39	91.39
TraesCS1A01G012600.1	Wheat	extracellular	90.21	90.48
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	91.1	83.42
Zm00001d035756_P001	Maize	vacuole	63.5	61.14
Os05t0104150-01	Rice	extracellular	60.24	59.36
TraesCS3B01G498900.1	Wheat	extracellular	59.64	59.12
EES17527	Sorghum	extracellular, plastid	62.61	53.69
TraesCS7B01G103900.1	Wheat	extracellular	52.52	52.52
TraesCS2B01G493300.1	Wheat	extracellular	48.66	47.54
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	45.7	45.03
KRG95348	Soybean	mitochondrion	46.88	45.01
Bra005918.1-P	Field mustard	extracellular	27.0	44.39
Bra009234.1-P	Field mustard	extracellular	43.32	44.11
CDX70060	Canola	extracellular	42.73	43.37
GSMUA_Achr9P12430_001	Banana	extracellular	38.28	42.72
CDX98965	Canola	extracellular	41.84	42.47
CDY58887	Canola	extracellular	41.54	42.42
CDY58884	Canola	extracellular	41.54	42.3
CDX98966	Canola	extracellular	41.84	42.22
Bra005919.1-P	Field mustard	extracellular	41.25	41.99
CDX70057	Canola	extracellular	41.84	41.96
Bra009237.1-P	Field mustard	extracellular	41.84	41.96
CDX70058	Canola	extracellular	41.54	41.92
CDX70059	Canola	extracellular	41.25	41.62
Bra009236.1-P	Field mustard	extracellular	41.25	41.62
AT5G06860.1	Thale cress	extracellular	40.65	41.52
CDX98967	Canola	extracellular	41.25	41.37
Bra009235.1-P	Field mustard	extracellular	40.95	41.32
CDX81023	Canola	extracellular	41.84	41.23
AT5G06870.1	Thale cress	extracellular	40.36	41.21
CDY58888	Canola	extracellular	41.25	40.64
Bra005917.1-P	Field mustard	extracellular	41.25	40.64
PGSC0003DMT400021883	Potato	extracellular	40.06	40.42
TraesCS2B01G226900.1	Wheat	extracellular	39.76	40.12
VIT_13s0064g01370.t01	Wine grape	extracellular	39.47	40.06
Bra009238.1-P	Field mustard	extracellular	39.47	40.06
KRH12976	Soybean	cytosol	43.62	39.52
Solyc09g014590.2.1	Tomato	extracellular	36.5	39.42
Solyc09g014480.1.1	Tomato	extracellular	38.58	38.81
Bra005916.1-P	Field mustard	extracellular	39.76	38.62
KRH12977	Soybean	nucleus	38.28	38.05
CDY58889	Canola	extracellular	39.17	38.04
TraesCS2B01G353300.1	Wheat	extracellular	35.31	36.28
TraesCS5B01G265900.1	Wheat	extracellular	37.69	35.98
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	40.06	35.06
CDX70056	Canola	extracellular	39.47	32.84
TraesCS7B01G094700.1	Wheat	plastid	30.27	29.48
TraesCS7B01G146800.1	Wheat	extracellular	32.05	28.42
TraesCS2B01G590900.1	Wheat	extracellular	33.53	25.28
CDX81022	Canola	extracellular, plasma membrane	34.72	23.12

Protein Annotations

EnsemblPlants:TraesCS1B01G017300.1	EnsemblPlantsGene:TraesCS1B01G017300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:8255759..8256772

Molecular Weight (calculated)

35897.7 Da

IEP (calculated)

4.858

GRAVY (calculated)

0.211

Length

337 amino acids

Sequence
(BLAST)

001: MAGASPLLLL SFLLLVSMAV ADQCHDDDHA ALVAIDTAMG SPYHFASWTP DSACCDWYDV DCDADTGRVV GLRVYQDANM SGAIPDAIGN LTFLETLTLH
101: HLPAISGAIP ESLAALSNLS ELTISYTGVS GPVPSFLGAL TALTLLDLSY NTLTGAIPPS IADLTSLSSI NLRRNRLSGA IPSLLLSKSP DGAYLQLSHN
201: NLSGAIPIDF ATVNFSYVDL SRNTLSGEAA CLFGADKALQ HLDVSRNALN FDLSAIEFPE QLTYVDLSHN TIRGAIPTQV ATLTGLQQFN VSFNRLCGTV
301: PTGGNMSRFD RYSYLHNKCL CGAPLTACRQ RPVGYLH

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.