Factsheet for Bra009235.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70059	Canola	extracellular	99.1	99.1
Bra009236.1-P	Field mustard	extracellular	83.23	83.23
Bra009237.1-P	Field mustard	extracellular	82.93	82.44
Bra009234.1-P	Field mustard	extracellular	77.25	77.95
AT5G06860.1	Thale cress	extracellular	76.35	77.27
Bra005918.1-P	Field mustard	extracellular	44.01	71.71
Bra009238.1-P	Field mustard	extracellular	70.06	70.48
Bra005919.1-P	Field mustard	extracellular	68.26	68.88
Bra005916.1-P	Field mustard	extracellular	70.66	68.01
Bra005917.1-P	Field mustard	extracellular	67.66	66.08
Solyc07g065090.1.1	Tomato	extracellular	57.48	58.72
PGSC0003DMT400057136	Potato	extracellular	57.19	58.23
VIT_08s0007g07690.t01	Wine grape	extracellular	58.98	57.27
KRH12977	Soybean	nucleus	55.69	54.87
KRG95348	Soybean	mitochondrion	56.89	54.13
Bra038700.1-P	Field mustard	extracellular, vacuole	52.1	53.54
TraesCS3A01G459300.1	Wheat	cytosol	22.46	50.68
Bra034774.1-P	Field mustard	extracellular	49.1	50.31
Bra034773.1-P	Field mustard	cytosol	46.41	49.21
KRH12976	Soybean	cytosol	53.59	48.12
GSMUA_Achr9P12430_001	Banana	extracellular	43.11	47.68
TraesCS3A01G459200.1	Wheat	extracellular	47.9	47.06
TraesCS3D01G451800.1	Wheat	extracellular	47.6	46.76
TraesCS3B01G498900.1	Wheat	extracellular	47.01	46.18
TraesCS3D01G451400.1	Wheat	extracellular	46.71	46.02
TraesCS3A01G459000.1	Wheat	extracellular	46.41	45.45
TraesCS3D01G451900.1	Wheat	extracellular	46.11	45.43
Zm00001d035753_P001	Maize	extracellular	46.11	45.16
EES17529	Sorghum	extracellular	45.81	44.87
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	47.9	44.82
HORVU3Hr1G098610.1	Barley	extracellular	44.61	44.35
EES17528	Sorghum	extracellular	44.01	43.36
Os05t0104200-01	Rice	extracellular	39.82	43.04
TraesCS3D01G451500.1	Wheat	extracellular	42.81	42.81
TraesCS7D01G200000.1	Wheat	cytosol	39.82	42.49
TraesCS1A01G012600.1	Wheat	extracellular	42.52	42.26
Zm00001d035756_P001	Maize	vacuole	44.01	42.0
TraesCS1D01G010800.1	Wheat	extracellular	42.22	41.84
TraesCS1B01G017300.1	Wheat	extracellular	41.32	40.95
Os05t0104150-01	Rice	extracellular	41.92	40.94
TraesCS2A01G470500.1	Wheat	extracellular	41.02	40.06
TraesCS2D01G470400.1	Wheat	extracellular	40.72	39.77
TraesCS7B01G103900.1	Wheat	extracellular	40.12	39.76
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	40.42	39.36
Os05t0104600-01	Rice	extracellular	39.52	38.94
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	39.82	38.89
TraesCS2B01G493300.1	Wheat	extracellular	40.12	38.84
HORVU2Hr1G106620.1	Barley	extracellular	39.52	38.82
TraesCS2A01G470600.1	Wheat	extracellular	38.62	38.17
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	41.32	37.5
EES17527	Sorghum	extracellular, plastid	43.71	37.15
Os05t0104700-01	Rice	extracellular	40.12	33.42
TraesCS7A01G197500.1	Wheat	extracellular	16.47	30.05
Bra023383.1-P	Field mustard	extracellular	29.94	28.82
Bra035741.1-P	Field mustard	extracellular	31.44	28.77
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.84	27.69
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	30.84	27.61
Bra008869.1-P	Field mustard	extracellular, plasma membrane	30.84	27.54
Bra008870.1-P	Field mustard	extracellular	30.54	27.35
Bra023925.1-P	Field mustard	extracellular	30.24	26.86
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	29.94	20.88
Bra010209.1-P	Field mustard	extracellular	29.34	20.5
Bra009680.1-P	Field mustard	extracellular, vacuole	34.73	19.76
Bra026499.1-P	Field mustard	plastid	27.25	18.38
Bra016239.1-P	Field mustard	cytosol	12.87	16.67

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	ProteinID:ACP28179	ProteinID:ACP28179.1	EnsemblPlantsGene:Bra009235	EnsemblPlants:Bra009235.1
EnsemblPlants:Bra009235.1-P	EMBL:FJ898289	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4CYD8	PFAM:PF00560
PFAM:PF08263	PANTHER:PTHR44138	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0002545393	SEG:seg

Description

AT5G06860 (E=6e-138) PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding

Coordinates

chrA10:+:15766918..15768022

Molecular Weight (calculated)

37630.2 Da

IEP (calculated)

8.876

GRAVY (calculated)

-0.151

Length

334 amino acids

Sequence
(BLAST)

001: MDNKTHTTLL FSLLFFITHL TNASSKDQCN QNDKKTLLKI KKSLNNPYHL ASWDPKSDCC AWNSLECDDA TVNRRVISLT IFSAQISGQI PPEVGDLPYL
101: QKLVFRKITN LTGQIPHTIT KLKYLRFLRL SWTNLTGPVP EFLSQLMDLA YLNLSFNYFS GSIPSSLSLL PKLSYVDLSR NKLTGTIPES FGSFSGEVPD
201: LFLSHNQLSG SIPKSLGNLD FNRIDFSRNR FIGDASMLFG ANKTTFSIDL SRNMFQFDLS RVEIPKTFGI LDLNHNGITG SIPVQWTETP FQIFNVSYNR
301: LCGRIPTGGK LQMFDSYAYF HNKCLCGAPL DSCK

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.