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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 2
  • extracellular 8
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035753_P001 Maize extracellular 88.86 88.86
EES17528 Sorghum extracellular 75.07 75.52
Os05t0104200-01 Rice extracellular 59.53 65.7
EES17527 Sorghum extracellular, plastid 61.58 53.44
Bra009236.1-P Field mustard extracellular 46.04 47.01
Bra005918.1-P Field mustard extracellular 28.15 46.83
Bra009237.1-P Field mustard extracellular 46.04 46.73
CDX70057 Canola extracellular 46.04 46.73
CDX70058 Canola extracellular 45.75 46.71
CDX98966 Canola extracellular 45.45 46.41
GSMUA_Achr9P12430_001 Banana extracellular 41.06 46.36
CDX70059 Canola extracellular 45.16 46.11
CDX98965 Canola extracellular 44.87 46.08
Bra009234.1-P Field mustard extracellular 44.57 45.92
CDX98967 Canola extracellular 45.16 45.83
Bra009235.1-P Field mustard extracellular 44.87 45.81
CDX70060 Canola extracellular 44.57 45.78
AT5G06860.1 Thale cress extracellular 43.7 45.15
KRG95348 Soybean mitochondrion 46.04 44.73
VIT_13s0064g01370.t01 Wine grape extracellular 43.4 44.58
CDY58887 Canola extracellular 43.11 44.55
AT5G06870.1 Thale cress extracellular 42.52 43.94
CDY58884 Canola extracellular 42.52 43.81
Bra005919.1-P Field mustard extracellular 42.23 43.5
Bra009238.1-P Field mustard extracellular 41.94 43.07
Solyc09g014480.1.1 Tomato extracellular 42.23 42.99
EER94664 Sorghum extracellular 35.48 42.91
PGSC0003DMT400021883 Potato extracellular 41.94 42.81
KRH12977 Soybean nucleus 42.52 42.77
Bra005917.1-P Field mustard extracellular 42.82 42.69
CDY58888 Canola extracellular 42.52 42.4
Solyc09g014590.2.1 Tomato extracellular 38.42 41.99
CDX81023 Canola extracellular 41.94 41.81
EER99569 Sorghum extracellular 39.88 40.84
Bra005916.1-P Field mustard extracellular 41.35 40.63
CDY58889 Canola extracellular 40.76 40.06
KRH12976 Soybean cytosol 43.11 39.52
EER99094 Sorghum mitochondrion, vacuole 40.47 39.32
OQU81782 Sorghum extracellular 39.0 38.66
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 42.23 37.4
CDX70056 Canola extracellular 41.94 35.31
EES14271 Sorghum cytosol 32.84 27.93
CDX81022 Canola extracellular, plasma membrane 36.66 24.7
KXG27431 Sorghum vacuole 31.09 20.23
Protein Annotations
MapMan:26.8.3.4Gene3D:3.80.10.10EntrezGene:8065284UniProt:C5YXZ4EnsemblPlants:EES17529ProteinID:EES17529
ProteinID:EES17529.1GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001611InterPro:IPR032675
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00560PFAM:PF08263PANTHER:PTHR44138
EnsemblPlantsGene:SORBI_3009G002600SUPFAM:SSF52058unigene:Sbi.9317SignalP:SignalP-noTMUniParc:UPI0001A88C22RefSeq:XP_002439099.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:217397..218648
Molecular Weight (calculated)
36182.2 Da
IEP (calculated)
7.473
GRAVY (calculated)
0.145
Length
341 amino acids
Sequence
(BLAST)
001: MKMMRSFIFV LLFLAAASPP AGASADSSSK QDRCHSGDKA ALLAIKAALG NPYHFASWTP DNPCCDWYDV DCDAATGRVV GLAVFQDANL TGTIPDAIAG
101: LVHLQNLMLH HLPGISGPIP QAIARLSNLS FLTISWTGVS GPVPSFLGSL TRLNQLDLSF NSLAGAVPAS LAALPSLYSI DISRNRLTGS LPPPLFSKLK
201: AQEAYLRLSH NNLTGTVPAE FTAVAFAQVD LSRNAFAGDA SGLFGRAKPV QQMDLSRNAF RFNLSTVELP EQLISLDLSH NAIYGGIPAQ VANLTNLQFF
301: NVSYNRLCGA VPTGGNTASF DASSYQHNRC LCGTPLADPC K
Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)
001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
Arabidopsis Description
PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.