CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006623_P001	Maize	extracellular	89.49	90.03
Zm00001d021836_P001	Maize	extracellular	88.59	88.86
Os07t0568700-02	Rice	extracellular	77.48	77.71
TraesCS2D01G207200.1	Wheat	extracellular	74.47	74.25
TraesCS2B01G226900.1	Wheat	extracellular	73.87	73.65
TraesCS2A01G199600.1	Wheat	extracellular	73.27	72.84
HORVU2Hr1G038990.1	Barley	plastid	74.77	68.22
EER99094	Sorghum	mitochondrion, vacuole	45.05	42.73
EES17528	Sorghum	extracellular	41.14	40.41
EES17529	Sorghum	extracellular	40.84	39.88
EER94664	Sorghum	extracellular	31.83	37.59
OQU81782	Sorghum	extracellular	38.44	37.21
EES17527	Sorghum	extracellular, plastid	40.54	34.35
EES14271	Sorghum	cytosol	34.23	28.43
KXG27431	Sorghum	vacuole	31.23	19.85

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	EntrezGene:8081770	UniProt:C5XBP7	EnsemblPlants:EER99569	ProteinID:EER99569
ProteinID:EER99569.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0004857	GO:GO:0005488	GO:GO:0005515
GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908	GO:GO:0030234	GO:GO:0043086
GO:GO:0048833	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44138
PANTHER:PTHR44138:SF5	SMART:SM00369	EnsemblPlantsGene:SORBI_3002G343600	SUPFAM:SSF52058	unigene:Sbi.14666	SignalP:SignalP-noTM
UniParc:UPI0001A842A6	RefSeq:XP_002463048.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:70990117..70991534

Molecular Weight (calculated)

35660.6 Da

IEP (calculated)

6.975

GRAVY (calculated)

-0.004

Length

333 amino acids

Sequence
(BLAST)

001: MASTTTATFL AVFLLVAASS SAPARSCAPS DLHALLSVKQ ALGNPATLST WTASSPNCCA WDHLRCNDAG RVNNVFIDAA DDVHGQIPSA VGGLTELMSL
101: TLFKLPGLTG SIPACLTALS KLEFLTISHT SVSGAIPESL TRLRSLDSVD LSSNQLTGTI PASFADLPNL RSLDLRHNQL TGTIPAGLVQ GQFRSLILSY
201: NQLTGPIPRD DAHDEINTVD LSHNKLTGDP SHLFVAGRPI GKVDLSWNYL DFDLSKLVFP PELTYLDLSH NHIRGTVPLS LERLSTLQKL DLSYNRLCGP
301: LPKGHGVIKH GCKPYAHNQC RKGTPLAGCQ DLE

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.