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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021836_P001 Maize extracellular 93.35 93.07
EER99569 Sorghum extracellular 90.03 89.49
Os07t0568700-02 Rice extracellular 78.55 78.31
TraesCS2D01G207200.1 Wheat extracellular 75.83 75.15
TraesCS2B01G226900.1 Wheat extracellular 75.23 74.55
TraesCS2A01G199600.1 Wheat extracellular 75.23 74.33
HORVU2Hr1G038990.1 Barley plastid 75.23 68.22
Zm00001d020944_P001 Maize extracellular 45.32 43.99
Zm00001d052892_P001 Maize endoplasmic reticulum, extracellular 30.51 42.08
Zm00001d035753_P001 Maize extracellular 41.69 40.47
Zm00001d035756_P001 Maize vacuole 40.48 38.29
Zm00001d029583_P001 Maize extracellular 32.02 37.32
Zm00001d003317_P001 Maize extracellular 36.86 36.31
Zm00001d031434_P001 Maize extracellular 34.74 30.18
Zm00001d026617_P001 Maize extracellular 30.82 19.77
Protein Annotations
MapMan:26.8.3.4Gene3D:3.80.10.10UniProt:A0A1D6EZ64GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
ProteinID:ONM24570.1PFAM:PF08263PFAM:PF13516PFAM:PF13855PRINTS:PR00019PFscan:PS51450
PANTHER:PTHR44138PANTHER:PTHR44138:SF5SMART:SM00369SUPFAM:SSF52058SignalP:SignalP-noTMUniParc:UPI0000038A5F
EnsemblPlantsGene:Zm00001d006623EnsemblPlants:Zm00001d006623_P001EnsemblPlants:Zm00001d006623_T001SEG:seg::
Description
Polygalacturonase inhibitor 1
Coordinates
chr2:-:212787428..212788423
Molecular Weight (calculated)
35350.4 Da
IEP (calculated)
7.756
GRAVY (calculated)
0.010
Length
331 amino acids
Sequence
(BLAST)
001: MASTTTTFLA VLLVVAASAA PARSCSPRDI HALLSVKQAL GNPASLSTWT PASPNCCAWD HLRCNDAGRV NNVFIDGADD VRGQIPSAVG GLTELMSLTL
101: FRLPGLTGAI PACLTALSNL QFLTVSHTNV SGAIPESLAR LRGLDSVDLS SNRLTGGIPA AFADLPSLRS LDLRHNQLTG PIPAGLVQGQ FRSLVLSYNQ
201: LTGPIPRDDA RDEINTVDLS HNRLTGDPSH LFAAGRPIGK VDLSWNYLNF DLSRLVFPPE LTYLDLSHNL IRGTVPLSLE RLSTLQKLDL SYNRLCGPLP
301: KGHGVIKHGC KPYAHNQCSK GTPLAGCQDL E
Best Arabidopsis Sequence Match ( AT5G06870.1 )
(BLAST)
001: MDKTMTLFLL LSTLLLTTSL AKDLCHKDDK TTLLKIKKSL NNPYHLASWD PKTDCCSWYC LECGDATVNH RVTSLIIQDG EISGQIPPEV GDLPYLTSLI
101: FRKLTNLTGH IQPTIAKLKN LTFLRLSWTN LTGPVPEFLS QLKNLEYIDL SFNDLSGSIP SSLSSLRKLE YLELSRNKLT GPIPESFGTF SGKVPSLFLS
201: HNQLSGTIPK SLGNPDFYRI DLSRNKLQGD ASILFGAKKT TWIVDISRNM FQFDLSKVKL AKTLNNLDMN HNGITGSIPA EWSKAYFQLL NVSYNRLCGR
301: IPKGEYIQRF DSYSFFHNKC LCGAPLPSCK
Arabidopsis Description
PGIP2PGIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDM1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.