Factsheet for Zm00001d029583_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94664	Sorghum	extracellular	85.21	85.82
TraesCS7A01G189800.1	Wheat	endoplasmic reticulum, extracellular	75.7	76.24
TraesCS7D01G190900.1	Wheat	extracellular	74.65	74.39
HORVU7Hr1G038570.1	Barley	mitochondrion	76.41	72.33
Os03t0436600-00	Rice	endoplasmic reticulum	77.11	66.57
TraesCS7B01G094700.1	Wheat	plastid	76.41	62.72
Zm00001d035753_P001	Maize	extracellular	42.25	35.19
Zm00001d020944_P001	Maize	extracellular	40.49	33.72
Zm00001d035756_P001	Maize	vacuole	40.85	33.14
Zm00001d021836_P001	Maize	extracellular	38.03	32.53
Zm00001d006623_P001	Maize	extracellular	37.32	32.02
Zm00001d003317_P001	Maize	extracellular	36.97	31.25
Zm00001d031434_P001	Maize	extracellular	38.38	28.61
Zm00001d052892_P001	Maize	endoplasmic reticulum, extracellular	22.18	26.25
Zm00001d026617_P001	Maize	extracellular	31.34	17.25

Protein Annotations

EMBL:EU970192	EnsemblPlants:Zm00001d029583_P001	EnsemblPlants:Zm00001d029583_T001	EnsemblPlantsGene:Zm00001d029583	EntrezGene:100284936	Gene3D:3.80.10.10
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PANTHER:PTHR44138	PANTHER:PTHR44138:SF1	PFAM:PF08263
ProteinID:ONL99040.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000182FA6C	UniProt:B6TYX7
MapMan:35.1	:	:	:	:	:

Description

Polygalacturonase inhibitor 1

Coordinates

chr1:+:77839833..77840687

Molecular Weight (calculated)

30032.2 Da

IEP (calculated)

8.202

GRAVY (calculated)

0.211

Length

284 amino acids

Sequence
(BLAST)

001: MQLKNRREAV TATVLVAVSV LATLARTDGA LCDKSDKAAL LAVKSALGNP LALSGWNSTV ACCSWEGISC NATTGRVTDL TVFALNISAP VPAAIANLTA
101: LQSVNLAYNQ LYGSIPAFLG PRALPDLTFL RLDGNRLSGA IPPTATVFNL LLVGNRLTGP IPAAFAGAAF GDVELSDNQL TGDASALFGA EKPLNALSLS
201: RNRFRFDLGR VELPEAMDIL EIDHNMVYGS IPAAAAERKW LAFDVSYNQL CGPIPQGRYT HRFGAKHFAG NKCLCGRPLP PCAY

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.