Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G190900.1 | Wheat | extracellular | 87.33 | 91.93 |
| TraesCS7A01G189800.1 | Wheat | endoplasmic reticulum, extracellular | 85.67 | 91.13 |
| TraesCS7B01G094700.1 | Wheat | plastid | 91.0 | 78.9 |
| EER94664 | Sorghum | extracellular | 73.33 | 78.01 |
| Zm00001d029583_P001 | Maize | extracellular | 72.33 | 76.41 |
| Os03t0436600-00 | Rice | endoplasmic reticulum | 70.33 | 64.13 |
| HORVU2Hr1G106620.1 | Barley | extracellular | 38.67 | 34.12 |
| HORVU3Hr1G098610.1 | Barley | extracellular | 37.33 | 33.33 |
| HORVU3Hr1G098730.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 39.33 | 33.05 |
| HORVU2Hr1G082160.1 | Barley | cytosol | 33.33 | 32.15 |
| HORVU5Hr1G073500.1 | Barley | extracellular, vacuole | 36.67 | 31.43 |
| HORVU2Hr1G082140.1 | Barley | extracellular | 34.0 | 31.0 |
| HORVU1Hr1G002410.1 | Barley | endoplasmic reticulum, vacuole | 36.67 | 29.89 |
| HORVU2Hr1G038990.1 | Barley | plastid | 33.67 | 27.67 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 31.0 | 23.97 |
| HORVU7Hr1G050140.1 | Barley | plastid | 31.0 | 23.85 |
| HORVU2Hr1G119550.1 | Barley | cytosol | 18.0 | 15.38 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G038570.1 | EnsemblPlantsGene:HORVU7Hr1G038570 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR44138 | PANTHER:PTHR44138:SF1 | PFAM:PF08263 | SEG:seg | SUPFAM:SSF52058 | UniParc:UPI000B47D1AC |
| UniProt:A0A287W489 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:98366795..98368065
Molecular Weight (calculated)
31797.4 Da
IEP (calculated)
9.407
GRAVY (calculated)
0.153
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: ASTLAVFSLT RNTTTMQLTN PCRRTMPFFV GVAVLVLAAA AARADGALCD KSDKAALLAI KSALGNHPDL SGWNSTAPCC AWPGISCSAT TGRVTELTVF
101: ALNISAPVPA AIANLTALQS VNLAYNRLYG RIPEFLGPRA LPDITFLRLD GNRLDGPIPP TATVHDLSVV GNRLTGPLPA AFAGAEFGSV DVADNQLTGD
201: ASVLFGARKR VNSLRLSRNR FAFDLGRVEL PGKLDILAVD HNMIYGAIPA AAATRKWLAF DVSYNNLCGP IPQGRYTHRF GPRHFAPNKC LCGRPLAPCS
101: ALNISAPVPA AIANLTALQS VNLAYNRLYG RIPEFLGPRA LPDITFLRLD GNRLDGPIPP TATVHDLSVV GNRLTGPLPA AFAGAEFGSV DVADNQLTGD
201: ASVLFGARKR VNSLRLSRNR FAFDLGRVEL PGKLDILAVD HNMIYGAIPA AAATRKWLAF DVSYNNLCGP IPQGRYTHRF GPRHFAPNKC LCGRPLAPCS
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.