Factsheet for HORVU3Hr1G098730.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, mitochondrion
Any Predictor:	endoplasmic reticulum, extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G451800.1	Wheat	extracellular	91.32	95.88
TraesCS3A01G459200.1	Wheat	extracellular	90.76	95.29
TraesCS3B01G498900.1	Wheat	extracellular	90.48	95.0
TraesCS3D01G451400.1	Wheat	extracellular	87.11	91.74
TraesCS3A01G459000.1	Wheat	extracellular	84.03	87.98
HORVU3Hr1G098610.1	Barley	extracellular	71.99	76.49
EES17528	Sorghum	extracellular	67.51	71.09
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	58.82	57.07
HORVU2Hr1G106620.1	Barley	extracellular	50.42	52.94
Bra009236.1-P	Field mustard	extracellular	46.5	49.7
CDX70058	Canola	extracellular	46.5	49.7
CDX98966	Canola	extracellular	45.66	48.8
CDX98965	Canola	extracellular	45.38	48.8
Bra005918.1-P	Field mustard	extracellular	28.01	48.78
Bra009234.1-P	Field mustard	extracellular	45.1	48.64
CDX70057	Canola	extracellular	45.66	48.51
Bra009237.1-P	Field mustard	extracellular	45.66	48.51
CDX70060	Canola	extracellular	45.1	48.49
AT5G06860.1	Thale cress	extracellular	44.82	48.48
CDX98967	Canola	extracellular	45.38	48.21
CDX70059	Canola	extracellular	45.1	48.2
Bra009235.1-P	Field mustard	extracellular	44.82	47.9
VIT_13s0064g01370.t01	Wine grape	extracellular	43.42	46.69
AT5G06870.1	Thale cress	extracellular	42.86	46.36
GSMUA_Achr9P12430_001	Banana	extracellular	39.22	46.36
CDX81023	Canola	extracellular	44.26	46.2
CDY58884	Canola	extracellular	42.58	45.92
Bra005917.1-P	Field mustard	extracellular	43.98	45.91
KRG95348	Soybean	mitochondrion	45.1	45.87
Bra009238.1-P	Field mustard	extracellular	42.58	45.78
CDY58887	Canola	extracellular	42.3	45.76
Bra005919.1-P	Field mustard	extracellular	42.3	45.62
CDY58888	Canola	extracellular	43.7	45.61
PGSC0003DMT400021883	Potato	extracellular	41.18	44.01
KRH12977	Soybean	nucleus	41.46	43.66
Solyc09g014590.2.1	Tomato	extracellular	38.1	43.59
Solyc09g014480.1.1	Tomato	extracellular	40.9	43.58
Bra005916.1-P	Field mustard	extracellular	41.18	42.36
HORVU2Hr1G082160.1	Barley	cytosol	36.41	41.8
CDY58889	Canola	extracellular	40.62	41.79
KRH12976	Soybean	cytosol	43.42	41.67
HORVU2Hr1G082140.1	Barley	extracellular	36.97	40.12
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	38.94	39.71
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	42.58	39.48
HORVU7Hr1G038570.1	Barley	mitochondrion	33.05	39.33
HORVU2Hr1G038990.1	Barley	plastid	39.5	38.63
CDX70056	Canola	extracellular	42.58	37.53
HORVU7Hr1G050110.1	Barley	vacuole	30.53	28.09
HORVU7Hr1G050140.1	Barley	plastid	30.53	27.95
CDX81022	Canola	extracellular, plasma membrane	36.13	25.49
HORVU2Hr1G119550.1	Barley	cytosol	17.93	18.23

Protein Annotations

EnsemblPlants:HORVU3Hr1G098730.2	EnsemblPlantsGene:HORVU3Hr1G098730	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix
UniParc:UPI000B46DA9F	UniProt:A0A287MGQ7	MapMan:26.8.3.4	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:659900227..659901664

Molecular Weight (calculated)

38422.2 Da

IEP (calculated)

7.990

GRAVY (calculated)

0.085

Length

357 amino acids

Sequence
(BLAST)

001: KWTHIITPHT DRHSLYRMRM RSRALLVLLL CSLLAGAANA EPSPDPTYKD CHPGDKAALL AVKAALGEAY HFASWTPDSP CCDWYDVTCD HFTGRVVGLA
101: VFQDANLTGT IPSALAGLPH LQDLTLRHLP ALSGPIPPAI GKLSNLSSLR ISWTAVSGPV PSFLGALKKL TFLELSFNSL TGAIPASLGT IPNLSGINLS
201: RNRLTGAIPP MFLSKSADQV YLWLSHNNLT GPVPAGFAAV NFAHLDLSRN GLTGDASGLF GLGKELQYID LSRNDFDFDL SAVVLPEQLY TVDLSHNAIH
301: GSIPAQVANL PNLQFFNVSY NRLCGPVPTG GNMARFDLYN FQHNKCLCGA PLSPCKK

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.