Factsheet for HORVU5Hr1G073500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	84.57	93.38
TraesCS5B01G265900.1	Wheat	extracellular	91.71	90.93
Os09t0491612-01	Rice	extracellular	69.14	70.76
EER99094	Sorghum	mitochondrion, vacuole	70.0	69.8
Zm00001d020944_P001	Maize	extracellular	67.14	68.92
GSMUA_Achr6P22250_001	Banana	extracellular	51.43	54.88
HORVU2Hr1G038990.1	Barley	plastid	44.0	42.19
HORVU2Hr1G082160.1	Barley	cytosol	37.43	42.12
HORVU2Hr1G082140.1	Barley	extracellular	38.86	41.34
HORVU3Hr1G098610.1	Barley	extracellular	38.29	39.88
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	39.71	38.94
HORVU2Hr1G106620.1	Barley	extracellular	37.14	38.24
HORVU7Hr1G038570.1	Barley	mitochondrion	31.43	36.67
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	35.71	33.97
HORVU7Hr1G050110.1	Barley	vacuole	31.14	28.09
HORVU7Hr1G050140.1	Barley	plastid	31.14	27.95
HORVU2Hr1G119550.1	Barley	cytosol	17.71	17.66

Protein Annotations

EnsemblPlants:HORVU5Hr1G073500.1	EnsemblPlantsGene:HORVU5Hr1G073500	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PANTHER:PTHR44138:SF2	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	UniParc:UPI000B473465	UniProt:A0A287RSG2	MapMan:26.8.3.4	:	:

Description

No Description!

Coordinates

chrchr5H:+:539453177..539454226

Molecular Weight (calculated)

37110.5 Da

IEP (calculated)

4.829

GRAVY (calculated)

0.175

Length

350 amino acids

Sequence
(BLAST)

001: MHEKQHTAAF VFPSAMAADL PSSSWHALLC LVLFSAVAVS SSAMDCDGDD RAALLRVKAQ LGDPVQLSSW LPATNCCAWE PPAVFCSAAG RVTWLALSSL
101: DGVRAPVPPA LGELPELVIL QVQSVRGLSG PIPPSFGNLT RLEDLNIAGT SISGPVPDFL AGLTSLRTLV ISNGKLTGPI PGCLGSLPDL RYLDLSGNML
201: TGGIPPGLLH GSFRFLILAN NQLTGEIPSD CGDDDVDTLN LSHNRLVGDP SPFLFGVTKP VAKVDLSWNE LEFDMTGVSF PHHLTFLDLS HNRINGSVAK
301: SLMDVKLEHF DVSYNGLCGE IPAGRFMSAH GAESYDQNRC LCGTPLPPCT

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.