Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G082160.1 | Barley | cytosol | 87.84 | 92.93 |
| TraesCS2B01G353300.1 | Wheat | extracellular | 91.49 | 91.77 |
| Zm00001d003317_P001 | Maize | extracellular | 61.7 | 60.42 |
| OQU81782 | Sorghum | extracellular | 62.01 | 59.3 |
| HORVU3Hr1G098610.1 | Barley | extracellular | 40.12 | 39.29 |
| HORVU5Hr1G073500.1 | Barley | extracellular, vacuole | 41.34 | 38.86 |
| HORVU3Hr1G098730.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 40.12 | 36.97 |
| HORVU2Hr1G106620.1 | Barley | extracellular | 37.08 | 35.88 |
| HORVU2Hr1G038990.1 | Barley | plastid | 39.21 | 35.34 |
| HORVU7Hr1G038570.1 | Barley | mitochondrion | 31.0 | 34.0 |
| HORVU1Hr1G002410.1 | Barley | endoplasmic reticulum, vacuole | 36.78 | 32.88 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 29.18 | 24.74 |
| HORVU7Hr1G050140.1 | Barley | plastid | 29.18 | 24.62 |
| HORVU2Hr1G119550.1 | Barley | cytosol | 17.02 | 15.95 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G082140.1 | EnsemblPlantsGene:HORVU2Hr1G082140 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44138 |
| PANTHER:PTHR44138:SF3 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI000B468D71 | UniProt:A0A287IN44 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:596660252..596661241
Molecular Weight (calculated)
36296.0 Da
IEP (calculated)
10.005
GRAVY (calculated)
-0.053
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNVALLLL LLSLQLTVSF SQQPGDDADF PTFLKIKEQF GDQAALVSLD PGTGPCNWAY AYCNQYRRVV AIFLQNVNIT STIPPAIGDL DQLHTISIAN
101: IPGLHGPIPD TFGKLSRLSI FNIMRTSVSG SLPASLSRTN LTSVSFFGNK LTGRIPRSLQ DLPYLTYFDA SNNRLVGRIP PRLVGNGTRD RPLGLTLTNN
201: RLTGPIPRTY ARERYFMNFR VANNMLTGDA AFLFGRRKTV YDVDLSGNRL RFNLTGVVMP ENLLFLNMSR NRIYGSVPAS LAQLKKLVTL DLSYNRLCGE
301: IPTGGNLGRF KAEAYEHNKC LCGTPLPAC
101: IPGLHGPIPD TFGKLSRLSI FNIMRTSVSG SLPASLSRTN LTSVSFFGNK LTGRIPRSLQ DLPYLTYFDA SNNRLVGRIP PRLVGNGTRD RPLGLTLTNN
201: RLTGPIPRTY ARERYFMNFR VANNMLTGDA AFLFGRRKTV YDVDLSGNRL RFNLTGVVMP ENLLFLNMSR NRIYGSVPAS LAQLKKLVTL DLSYNRLCGE
301: IPTGGNLGRF KAEAYEHNKC LCGTPLPAC
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.