Factsheet for HORVU2Hr1G106620.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	91.76	90.96
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	90.29	89.77
TraesCS2A01G470600.1	Wheat	extracellular	84.71	85.21
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	52.94	50.42
HORVU3Hr1G098610.1	Barley	extracellular	48.82	49.4
Os05t0104600-01	Rice	extracellular	48.24	48.38
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	47.65	44.02
Os05t0104700-01	Rice	extracellular	50.88	43.14
Solyc09g014590.2.1	Tomato	extracellular	39.41	42.95
Bra005918.1-P	Field mustard	extracellular	25.88	42.93
Solyc09g014480.1.1	Tomato	extracellular	42.06	42.69
Bra009237.1-P	Field mustard	extracellular	40.59	41.07
Bra009236.1-P	Field mustard	extracellular	40.29	41.02
PGSC0003DMT400021883	Potato	extracellular	40.29	41.02
CDX70057	Canola	extracellular	40.0	40.48
GSMUA_Achr9P12430_001	Banana	extracellular	35.88	40.4
CDX70058	Canola	extracellular	39.41	40.12
CDX98966	Canola	extracellular	39.12	39.82
Bra009234.1-P	Field mustard	extracellular	38.53	39.58
Bra009235.1-P	Field mustard	extracellular	38.82	39.52
CDX70059	Canola	extracellular	38.82	39.52
VIT_13s0064g01370.t01	Wine grape	extracellular	38.53	39.46
CDX70060	Canola	extracellular	38.53	39.46
CDX98965	Canola	extracellular	38.24	39.16
CDX98967	Canola	extracellular	38.53	38.99
HORVU2Hr1G082160.1	Barley	cytosol	35.59	38.91
CDY58884	Canola	extracellular	37.65	38.67
HORVU7Hr1G038570.1	Barley	mitochondrion	34.12	38.67
AT5G06870.1	Thale cress	extracellular	37.35	38.48
KRG95348	Soybean	mitochondrion	39.71	38.46
Bra005919.1-P	Field mustard	extracellular	37.35	38.37
CDX81023	Canola	extracellular	38.53	38.3
CDY58888	Canola	extracellular	38.24	38.01
Bra005917.1-P	Field mustard	extracellular	38.24	38.01
CDY58887	Canola	extracellular	36.47	37.58
Bra009238.1-P	Field mustard	extracellular	36.47	37.35
KRH12977	Soybean	nucleus	37.06	37.17
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	38.24	37.14
HORVU2Hr1G082140.1	Barley	extracellular	35.88	37.08
AT5G06860.1	Thale cress	extracellular	35.88	36.97
Bra005916.1-P	Field mustard	extracellular	36.18	35.45
HORVU2Hr1G038990.1	Barley	plastid	37.65	35.07
CDY58889	Canola	extracellular	35.59	34.87
KRH12976	Soybean	cytosol	37.35	34.14
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	36.18	31.95
CDX70056	Canola	extracellular	36.47	30.62
HORVU7Hr1G050110.1	Barley	vacuole	30.0	26.29
HORVU7Hr1G050140.1	Barley	plastid	30.0	26.15
CDX81022	Canola	extracellular, plasma membrane	30.59	20.55
HORVU2Hr1G119550.1	Barley	cytosol	18.24	17.66

Protein Annotations

EMBL:AK361964	EnsemblPlants:HORVU2Hr1G106620.1	EnsemblPlantsGene:HORVU2Hr1G106620	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44138	PFAM:PF00560	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
UniParc:UPI0002005F54	UniProt:F2DDJ7	MapMan:26.8.3.4	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DDJ7]

Coordinates

chrchr2H:-:709855883..709857100

Molecular Weight (calculated)

36010.1 Da

IEP (calculated)

5.261

GRAVY (calculated)

0.236

Length

340 amino acids

Sequence
(BLAST)

001: MRASSFVERV VVVVLLAAVA AVARTKDECH SGDKAALLAI KSAFGNASYF NSWTPDTPCC EWSNVSCDGS ASPYTARRVV GVSLVDDASL AGPLPGAAIA
101: RLTALQQLLL NNVPGVRGTI PHDLTRLNAT LAFLDIISTG ISGPVPSFLS EITALGYLSL SSNKLTGPIP ASLGDMPNLY FLDLGDNRLT GTIPPLLLSK
201: ASDAYLYLSH NKLTGVVPAE FAAVTFSTID LSYNGFKGDA SFLLGANKPL LNLDLSHNAF SFNLSAVQLP EGLNSLELSH NDIYGDIPEM VVDLMLNYLN
301: VSYNRLSGVV PAGGNMAWFD QSCFQHNKGL CGSPLPPCKQ

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.