Factsheet for Bra005917.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58888	Canola	extracellular	99.71	99.71
Bra005919.1-P	Field mustard	extracellular	85.38	88.22
Bra005918.1-P	Field mustard	extracellular	50.88	84.88
Bra005916.1-P	Field mustard	extracellular	82.16	80.98
Bra009238.1-P	Field mustard	extracellular	72.81	75.0
AT5G06870.1	Thale cress	extracellular	69.01	71.52
Bra009234.1-P	Field mustard	extracellular	66.37	68.58
Bra009235.1-P	Field mustard	extracellular	66.08	67.66
Bra009236.1-P	Field mustard	extracellular	64.91	66.47
Bra009237.1-P	Field mustard	extracellular	64.04	65.18
Solyc07g065090.1.1	Tomato	extracellular	53.51	55.96
VIT_08s0007g07690.t01	Wine grape	extracellular	55.85	55.52
PGSC0003DMT400057136	Potato	extracellular	52.63	54.88
KRH12977	Soybean	nucleus	54.39	54.87
KRG95348	Soybean	mitochondrion	54.68	53.28
TraesCS3A01G459300.1	Wheat	cytosol	22.22	51.35
Bra038700.1-P	Field mustard	extracellular, vacuole	48.54	51.08
Bra034774.1-P	Field mustard	extracellular	47.37	49.69
Bra034773.1-P	Field mustard	cytosol	45.61	49.52
KRH12976	Soybean	cytosol	53.8	49.46
GSMUA_Achr9P12430_001	Banana	extracellular	42.98	48.68
TraesCS3D01G451800.1	Wheat	extracellular	46.49	46.76
TraesCS3A01G459200.1	Wheat	extracellular	46.49	46.76
TraesCS3B01G498900.1	Wheat	extracellular	45.61	45.88
TraesCS3D01G451900.1	Wheat	extracellular	45.03	45.43
TraesCS3D01G451400.1	Wheat	extracellular	44.44	44.84
Os05t0104200-01	Rice	extracellular	40.35	44.66
Zm00001d035753_P001	Maize	extracellular	44.15	44.28
HORVU3Hr1G098610.1	Barley	extracellular	43.27	44.05
TraesCS3A01G459000.1	Wheat	extracellular	43.86	43.99
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	45.91	43.98
EES17529	Sorghum	extracellular	42.69	42.82
TraesCS3D01G451500.1	Wheat	extracellular	41.81	42.81
TraesCS1A01G012600.1	Wheat	extracellular	41.81	42.56
TraesCS1D01G010800.1	Wheat	extracellular	41.81	42.43
EES17528	Sorghum	extracellular	41.81	42.18
TraesCS7D01G200000.1	Wheat	cytosol	38.01	41.53
Os05t0104150-01	Rice	extracellular	41.52	41.52
TraesCS1B01G017300.1	Wheat	extracellular	40.64	41.25
Os05t0104600-01	Rice	extracellular	40.64	41.0
Zm00001d035756_P001	Maize	vacuole	41.81	40.86
TraesCS7B01G103900.1	Wheat	extracellular	38.6	39.17
TraesCS2A01G470500.1	Wheat	extracellular	38.3	38.3
TraesCS2B01G493200.1	Wheat	endoplasmic reticulum, extracellular	38.3	38.3
TraesCS2D01G470400.1	Wheat	extracellular	38.3	38.3
HORVU2Hr1G106620.1	Barley	extracellular	38.01	38.24
TraesCS2D01G470500.1	Wheat	extracellular, vacuole	38.3	38.19
TraesCS2A01G470600.1	Wheat	extracellular	36.84	37.28
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	40.06	37.23
EES17527	Sorghum	extracellular, plastid	42.4	36.9
TraesCS2B01G493300.1	Wheat	extracellular	37.13	36.81
Os05t0104700-01	Rice	extracellular	40.94	34.91
TraesCS7A01G197500.1	Wheat	extracellular	16.67	31.15
Bra035741.1-P	Field mustard	extracellular	31.58	29.59
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	31.29	28.76
Bra023383.1-P	Field mustard	extracellular	28.95	28.53
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	30.99	28.42
Bra008869.1-P	Field mustard	extracellular, plasma membrane	29.82	27.27
Bra008870.1-P	Field mustard	extracellular	29.53	27.08
Bra023925.1-P	Field mustard	extracellular	29.24	26.6
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	30.41	21.71
Bra010209.1-P	Field mustard	extracellular	29.82	21.34
Bra009680.1-P	Field mustard	extracellular, vacuole	34.8	20.27
Bra026499.1-P	Field mustard	plastid	27.19	18.79
Bra016239.1-P	Field mustard	cytosol	13.74	18.22

Protein Annotations

MapMan:26.8.3.4	Gene3D:3.80.10.10	ProteinID:AAQ01566	ProteinID:AAQ01566.1	ProteinID:ACP28178	ProteinID:ACP28178.1
EMBL:AY337002	EnsemblPlantsGene:Bra005917	EnsemblPlants:Bra005917.1	EnsemblPlants:Bra005917.1-P	EMBL:FJ898288	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	UniProt:M4CNX9	PFAM:PF08263	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44138
SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI000253F659	SEG:seg	:	:

Description

AT5G06870 (E=1e-116) PGIP2, ATPGIP2 | PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding

Coordinates

chrA03:+:1212972..1214086

Molecular Weight (calculated)

38254.1 Da

IEP (calculated)

7.709

GRAVY (calculated)

-0.152

Length

342 amino acids

Sequence
(BLAST)

001: MGKTTILLLL LFALLLTTSL SKDLCHKDDK NTLLKIKKAM NDPYTIISWD PKDDCCTWYS VECGNANRVT SLDLSDDDVS AQIPPEVGDL PYLQYLTFRK
101: LPNLTGEIPP TIAKLKYLKS LWLSWNSLTG PVPEFLSQLK NLEYINLSFN KLSGSIPGSL SLLPKLDFLE LSRNKLTGPI PESFGSFKRA VYGIYLSHNQ
201: LSGSIPKSLG NIDFNTIDLS RNKLEGDASM LFGVKKTTWH IDLSRNMFQF DISKVKVAKT VNFLDLNHNG LTGSIPDQWT QLDLQTFNVS YNRLCGRIPQ
301: GGDLQSFDAY AYLHNKCLCG APLPSCNVKI QATDLYLNLP SE

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.