Factsheet for TraesCS2A01G470500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G493300.1	Wheat	extracellular	93.86	93.04
TraesCS2D01G470400.1	Wheat	extracellular	92.69	92.69
TraesCS2A01G470600.1	Wheat	extracellular	64.33	65.09
TraesCS3A01G459300.1	Wheat	cytosol	24.85	57.43
TraesCS3A01G459200.1	Wheat	extracellular	52.63	52.94
TraesCS3A01G459000.1	Wheat	extracellular	49.42	49.56
TraesCS1A01G012600.1	Wheat	extracellular	47.95	48.81
Os05t0104600-01	Rice	extracellular	46.49	46.9
Bra005918.1-P	Field mustard	extracellular	26.02	43.41
Os05t0104700-01	Rice	extracellular	50.0	42.64
CDX98966	Canola	extracellular	40.64	41.62
Bra009237.1-P	Field mustard	extracellular	40.64	41.37
CDX70058	Canola	extracellular	40.35	41.32
Bra009234.1-P	Field mustard	extracellular	39.77	41.09
GSMUA_Achr9P12430_001	Banana	extracellular	36.26	41.06
Solyc09g014590.2.1	Tomato	extracellular	37.43	41.03
CDX70059	Canola	extracellular	40.06	41.02
Bra009236.1-P	Field mustard	extracellular	40.06	41.02
Bra009235.1-P	Field mustard	extracellular	40.06	41.02
CDX70057	Canola	extracellular	40.06	40.77
TraesCS7A01G189800.1	Wheat	endoplasmic reticulum, extracellular	33.33	40.43
CDX70060	Canola	extracellular	39.18	40.36
PGSC0003DMT400021883	Potato	extracellular	39.18	40.12
Solyc09g014480.1.1	Tomato	extracellular	39.18	40.0
CDX98967	Canola	extracellular	39.18	39.88
AT5G06870.1	Thale cress	extracellular	38.3	39.7
AT5G06860.1	Thale cress	extracellular	38.3	39.7
KRG95348	Soybean	mitochondrion	40.64	39.6
CDX98965	Canola	extracellular	38.3	39.46
CDX81023	Canola	extracellular	38.89	38.89
CDY58887	Canola	extracellular	37.43	38.79
CDY58884	Canola	extracellular	37.43	38.67
Bra009238.1-P	Field mustard	extracellular	37.43	38.55
Bra005919.1-P	Field mustard	extracellular	37.13	38.37
CDY58888	Canola	extracellular	38.3	38.3
Bra005917.1-P	Field mustard	extracellular	38.3	38.3
KRH12977	Soybean	nucleus	37.72	38.05
VIT_13s0064g01370.t01	Wine grape	extracellular	36.84	37.95
TraesCS7A01G197500.1	Wheat	extracellular	20.18	37.7
Bra005916.1-P	Field mustard	extracellular	38.01	37.46
TraesCS2A01G199600.1	Wheat	extracellular	36.55	37.31
CDY58889	Canola	extracellular	37.13	36.6
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.92	36.59
KRH12976	Soybean	cytosol	38.89	35.75
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	36.84	32.73
CDX70056	Canola	extracellular	37.43	31.6
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.7	27.63
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	29.82	22.82
CDX81022	Canola	extracellular, plasma membrane	31.87	21.54

Protein Annotations

EnsemblPlants:TraesCS2A01G470500.1	EnsemblPlantsGene:TraesCS2A01G470500	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44138
PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix
MapMan:26.8.3.4	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:713142421..713143449

Molecular Weight (calculated)

36333.9 Da

IEP (calculated)

8.898

GRAVY (calculated)

0.208

Length

342 amino acids

Sequence
(BLAST)

001: MRASSLGRCA TVALAVLLAA VAAAAPAART KNECHAGDKA ALLAIKAGFG NASYFQSWTP DNPCCEWISV FCDLSASPYT LRRVVAVSFL RDASLVGPLP
101: GASVARLTAL QQLVLIHVPG VNGTLPRDLA RLSNLNFIDV SYTGISGPVP PFLSRLTKLT YLRLSFNSLT GPIPASLADV PNLSFLDLGG NRLKGTIPHL
201: LLGRTNDTAY LSLSHNNLTG GVPADLAAVR FSSLDLSHNA LAGEASVLFG LNKSLEKLDL SRNSFSFNLS AVTLPSQLGM LDISHNDVYG VLPPQVATLQ
301: YLNVSYNRLS GRVPIGGNMD RFDQYCFQHN KGLCGTPLPP CK

Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)

001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC

Arabidopsis Description

FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.