Factsheet for TraesCS7A01G189800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G190900.1	Wheat	extracellular	92.55	91.58
HORVU7Hr1G038570.1	Barley	mitochondrion	91.13	85.67
EER94664	Sorghum	extracellular	78.01	78.01
TraesCS7B01G094700.1	Wheat	plastid	94.68	77.17
Zm00001d029583_P001	Maize	extracellular	76.24	75.7
Os03t0436600-00	Rice	endoplasmic reticulum	74.82	64.13
TraesCS3A01G459300.1	Wheat	cytosol	23.05	43.92
TraesCS3A01G459200.1	Wheat	extracellular	44.33	36.76
TraesCS3A01G459000.1	Wheat	extracellular	43.26	35.78
TraesCS2A01G470500.1	Wheat	extracellular	40.43	33.33
TraesCS2A01G470600.1	Wheat	extracellular	39.72	33.14
TraesCS5A01G266200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.52	32.49
TraesCS2A01G199600.1	Wheat	extracellular	37.59	31.64
TraesCS1A01G012600.1	Wheat	extracellular	37.23	31.25
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	32.98	24.47
TraesCS7A01G197500.1	Wheat	extracellular	14.54	22.4
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	32.27	20.36

Protein Annotations

EnsemblPlants:TraesCS7A01G189800.1	EnsemblPlantsGene:TraesCS7A01G189800	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR44138	PANTHER:PTHR44138:SF1	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:147051674..147052522

Molecular Weight (calculated)

29395.6 Da

IEP (calculated)

8.330

GRAVY (calculated)

0.271

Length

282 amino acids

Sequence
(BLAST)

001: MQLTSPCRHT MPLLVAVLVL AAAAAADGAL CDKADKAALL AVKSALGNHP DLSGWNSTAP CCAWPGISCD AATGRVTELT VFALNISAPV PAAIANLTAL
101: QTVNLAYNRL YGRIPAFLGP RALPDLTFLR LDGNLLDGPI PPTATVHDLS VVGNRLAGPL PAAFAGAEFG SVDLADNQLT GDASALFGAG KRVNSVRLSR
201: NRFAFDLGRV ELPAALDILA VDHNMMYGGI PAAAAARKWL AFDVSYNSLC GSIPQGRYTH RFGPKHFAPN KCLCGRPLAP CS

Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)

001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK

Arabidopsis Description

PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.