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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009234.1-P Field mustard extracellular 99.1 99.4
CDX98965 Canola extracellular 96.39 96.39
AT5G06860.1 Thale cress extracellular 82.23 82.73
CDX70058 Canola extracellular 78.31 77.84
CDX98966 Canola extracellular 77.41 76.95
CDX70059 Canola extracellular 77.11 76.65
CDX70057 Canola extracellular 77.11 76.19
CDX98967 Canola extracellular 77.11 76.19
CDY58887 Canola extracellular 69.28 69.7
CDY58884 Canola extracellular 68.67 68.88
CDY58889 Canola extracellular 70.78 67.72
CDY58888 Canola extracellular 68.37 66.37
CDX81023 Canola extracellular 67.47 65.5
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 71.99 62.08
Solyc07g065090.1.1 Tomato extracellular 59.34 60.24
VIT_08s0007g07690.t01 Wine grape extracellular 62.35 60.17
PGSC0003DMT400057136 Potato extracellular 59.04 59.76
CDX70056 Canola extracellular 71.99 59.01
KRG95348 Soybean mitochondrion 61.75 58.4
KRH12977 Soybean nucleus 55.42 54.28
CDY52623 Canola extracellular, vacuole 52.41 53.54
CDY50569 Canola extracellular, vacuole 52.11 53.23
TraesCS3A01G459300.1 Wheat cytosol 23.49 52.7
CDY05006 Canola extracellular 50.0 51.23
CDY14065 Canola extracellular 48.8 50.0
KRH12976 Soybean cytosol 55.12 49.19
CDY42127 Canola extracellular 48.19 49.08
CDY08451 Canola endoplasmic reticulum, extracellular 47.89 48.77
CDY08448 Canola extracellular 47.29 48.01
CDY42130 Canola extracellular 47.29 48.01
CDY42131 Canola extracellular 46.69 47.99
TraesCS3A01G459200.1 Wheat extracellular 48.8 47.65
TraesCS3D01G451800.1 Wheat extracellular 48.49 47.35
TraesCS3B01G498900.1 Wheat extracellular 47.89 46.76
CDY08450 Canola extracellular 45.48 46.75
CDY42129 Canola cytosol 45.48 46.6
TraesCS3D01G451900.1 Wheat extracellular 46.99 46.02
TraesCS3D01G451400.1 Wheat extracellular 46.69 45.72
TraesCS3A01G459000.1 Wheat extracellular 46.69 45.45
Os05t0104200-01 Rice extracellular 42.17 45.31
Zm00001d035753_P001 Maize extracellular 46.39 45.16
EES17528 Sorghum extracellular 46.08 45.13
HORVU3Hr1G098730.2 Barley endoplasmic reticulum, extracellular, mitochondrion 48.49 45.1
EES17529 Sorghum extracellular 45.78 44.57
GSMUA_Achr9P12430_001 Banana extracellular 40.36 44.37
TraesCS3D01G451500.1 Wheat extracellular 44.28 44.01
HORVU3Hr1G098610.1 Barley extracellular 44.28 43.75
TraesCS1A01G012600.1 Wheat extracellular 44.28 43.75
TraesCS1D01G010800.1 Wheat extracellular 44.28 43.62
TraesCS7D01G200000.1 Wheat cytosol 40.96 43.45
Zm00001d035756_P001 Maize vacuole 45.18 42.86
TraesCS1B01G017300.1 Wheat extracellular 43.37 42.73
Os05t0104150-01 Rice extracellular 43.37 42.11
CDX81022 Canola extracellular, plasma membrane 62.65 41.11
Os05t0104600-01 Rice extracellular 41.87 41.0
TraesCS2B01G493200.1 Wheat endoplasmic reticulum, extracellular 40.66 39.47
TraesCS7B01G103900.1 Wheat extracellular 40.06 39.47
HORVU1Hr1G002410.1 Barley endoplasmic reticulum, vacuole 43.67 39.4
TraesCS2A01G470500.1 Wheat extracellular 40.36 39.18
TraesCS2D01G470400.1 Wheat extracellular 39.76 38.6
HORVU2Hr1G106620.1 Barley extracellular 39.46 38.53
TraesCS2D01G470500.1 Wheat extracellular, vacuole 39.76 38.48
TraesCS2B01G493300.1 Wheat extracellular 39.46 37.97
TraesCS2A01G470600.1 Wheat extracellular 38.55 37.87
EES17527 Sorghum extracellular, plastid 44.58 37.66
Os05t0104700-01 Rice extracellular 43.07 35.66
TraesCS7A01G197500.1 Wheat extracellular 17.47 31.69
CDY52664 Canola extracellular 32.23 28.69
CDX85681 Canola extracellular 29.52 28.41
CDX91155 Canola extracellular 29.52 28.32
CDY50534 Canola extracellular, vacuole 31.63 28.15
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 31.33 27.96
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 31.33 27.96
CDY60388 Canola extracellular 30.72 27.95
CDY19601 Canola extracellular 30.72 27.95
CDY27559 Canola extracellular 30.42 27.67
CDY06385 Canola extracellular 30.12 27.4
CDY53975 Canola extracellular 29.82 26.54
CDY68308 Canola extracellular 29.52 26.2
CDY69775 Canola extracellular, plasma membrane 29.22 25.73
CDY69275 Canola extracellular 28.61 25.4
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 11.45 23.31
CDY15279 Canola plastid 27.11 21.13
CDY40923 Canola extracellular, vacuole 29.52 20.9
CDY38783 Canola extracellular 25.6 20.73
CDX80361 Canola extracellular, vacuole 35.54 20.1
CDX88024 Canola extracellular, vacuole 35.54 20.1
CDY11623 Canola extracellular 25.0 19.86
CDY64876 Canola extracellular, vacuole 33.43 19.04
CDY16850 Canola plastid 27.11 18.18
CDX93758 Canola plastid 12.95 16.73
Protein Annotations
EnsemblPlants:CDX70060EnsemblPlantsGene:GSBRNA2T00136160001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44138
PFAM:PF08263PFAM:PF13855PRINTS:PR00019ProteinID:CDX70060ProteinID:CDX70060.1SEG:seg
SignalP:SignalP-noTMSUPFAM:SSF52058UniParc:UPI0004EE605EMapMan:26.8.3.4::
Description
BnaA10g24090D
Coordinates
chrLK031790:-:2914858..2916101
Molecular Weight (calculated)
37190.8 Da
IEP (calculated)
8.616
GRAVY (calculated)
-0.079
Length
332 amino acids
Sequence
(BLAST)
001: MDKTTTLLLF FFLFTFLTTS FSKNLCNQDD KTTLLKIKKA LNNPYHLASW DPRTDCCSWY CLECGDATVN HRVTALTIFS GQISGQIPPE VGDLSYLQTL
101: VFRKLTNLTG QIPRTIAKLK YLRSLRLSWT NLTGPVPGFL SELKNLQWVD LSFNDLSGSI PSSLSLLPNL VSLDLSRNKL TAGSIPESFG SFPAKVPDLY
201: LSHNQLSGYI PKTLGNLDFS KIDFSRNKLG GDASMLFRAN KTTWYIDLSR NMLQFDLSRV VIPKTLGILD LNHNGITGNI PVQWTEAPLQ FFNVSYNRLC
301: GHIPTGGTLQ EFDTYSYFHN KCLCGAPLDS CK
Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)
001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
Arabidopsis Description
PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.