Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93758 Canola plastid 58.45 96.89
CDY40923 Canola extracellular, vacuole 95.07 86.35
Bra028006.1-P Field mustard endoplasmic reticulum, vacuole 94.37 83.92
AT1G33590.2 Thale cress plastid 82.39 68.29
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 24.18 63.19
CDY38783 Canola extracellular 54.93 57.07
CDY11623 Canola extracellular 54.93 55.98
PGSC0003DMT400043544 Potato extracellular 59.62 53.14
KRH56366 Soybean nucleus 60.56 52.76
Solyc10g052880.1.1 Tomato extracellular 58.22 51.88
CDY53975 Canola extracellular 25.59 29.22
CDY69275 Canola extracellular 25.59 29.14
VIT_18s0089g00010.t01 Wine grape plasma membrane 63.85 28.48
CDY52623 Canola extracellular, vacuole 21.6 28.31
CDY68308 Canola extracellular 24.65 28.07
CDY50569 Canola extracellular, vacuole 21.36 28.0
CDY52664 Canola extracellular 24.41 27.88
CDY42131 Canola extracellular 21.13 27.86
CDX70057 Canola extracellular 21.83 27.68
CDY50534 Canola extracellular, vacuole 24.18 27.61
CDY42127 Canola extracellular 21.13 27.61
CDY08451 Canola endoplasmic reticulum, extracellular 21.13 27.61
CDY69775 Canola extracellular, plasma membrane 24.41 27.59
CDX70058 Canola extracellular 21.6 27.54
CDX85681 Canola extracellular 22.3 27.54
CDX91155 Canola extracellular 22.3 27.46
CDY05006 Canola extracellular 20.66 27.16
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 23.71 27.15
CDX70060 Canola extracellular 21.13 27.11
CDX98967 Canola extracellular 21.36 27.08
CDX98966 Canola extracellular 21.13 26.95
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 23.47 26.88
CDY19601 Canola extracellular 23.0 26.85
CDX98965 Canola extracellular 20.89 26.81
CDY58884 Canola extracellular 20.66 26.59
CDY58887 Canola extracellular 20.42 26.36
CDY60388 Canola extracellular 22.54 26.3
CDY27559 Canola extracellular 22.54 26.3
CDY42130 Canola extracellular 20.19 26.3
CDY14065 Canola extracellular 19.95 26.23
CDX70059 Canola extracellular 20.42 26.05
CDY06385 Canola extracellular 22.3 26.03
CDY58888 Canola extracellular 20.89 26.02
CDY08448 Canola extracellular 19.72 25.69
CDY16850 Canola plastid 29.58 25.45
CDY08450 Canola extracellular 19.25 25.39
CDX81023 Canola extracellular 20.19 25.15
CDY42129 Canola cytosol 19.01 25.0
CDY58889 Canola extracellular 19.72 24.21
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 21.13 23.38
CDY64876 Canola extracellular, vacuole 31.92 23.33
CDX80361 Canola extracellular, vacuole 31.22 22.66
CDX88024 Canola extracellular, vacuole 30.99 22.49
CDX70056 Canola extracellular 21.13 22.22
CDX81022 Canola extracellular, plasma membrane 17.84 15.02
Protein Annotations
EnsemblPlants:CDY15279EnsemblPlantsGene:GSBRNA2T00085485001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR45271PFAM:PF13855
ProteinID:CDY15279ProteinID:CDY15279.1SignalP:SignalP-noTMSUPFAM:SSF52058UniParc:UPI0004EE3A0FUniProt:A0A078FQX7
MapMan:35.1:::::
Description
BnaC06g07650DBnaC06g07650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQX7]
Coordinates
chrLK032053:+:56222..57657
Molecular Weight (calculated)
46918.4 Da
IEP (calculated)
10.155
GRAVY (calculated)
0.088
Length
426 amino acids
Sequence
(BLAST)
001: MNSSSSFSVF IFTAVIILRC LTPSKPPRVI QMTRQKGTAC CSWNGITCLT GDRVTALTVS GQSEVAGSFL SGTISSSLAK LQHLDGIYFM NLKNITGPFP
101: QFLFRLPQLK FIEMFLEGNR FTGPIPTSIS NLTKLSQLNL GGIANLKLMS FLNLGGNRLS GTIPDIFKSM PELRSLVLSR NGFSGNLPPS IASLAPILRF
201: LEVGRNKLSG KIPDYLSRFK ALDTLDLSRN QFSGVVPKSF ANLTKIFNLD LSHNLLTDPF PALYVKGIES LDLSYNKFHL KTIPKWVTSS PIIFSLKLAK
301: CGIKMSLDDW KPAEYYFYDF IDLSQNEISG SPARFLNQTE YLVEFRAPGN KLRFDMGKLT FAKTLKTLDL SRNLVFGKVP ATVAGLQTLY VSQNHLCGKL
401: PTTKFPASAF AGNDCLCGPP LSPCKV
Best Arabidopsis Sequence Match ( AT1G33590.2 )
(BLAST)
001: MQMDWSKTST LTSQLSSNLF PTTNSSLLSI NTTQFTTMNS SFTLFIFTFV IFLQCLNPTG AATCHPDDEA GLLAFKAGIT RDPSGILSSW KKGTACCSWN
101: GVTCLTTDRV SALSVAGQAD VAGSFLSGTL SPSLAKLKHL DGIYFTDLKN ITGSFPQFLF QLPNLKYVYI ENNRLSGTLP ANIGALSQLE AFSLEGNRFT
201: GPIPSSISNL TLLTQLKLGN NLLTGTIPLG VANLKLMSYL NLGGNRLTGT IPDIFKSMPE LRSLTLSRNG FSGNLPPSIA SLAPILRFLE LGHNKLSGTI
301: PNFLSNFKAL DTLDLSKNRF SGVIPKSFAN LTKIFNLDLS HNLLTDPFPV LNVKGIESLD LSYNQFHLNT IPKWVTSSPI IFSLKLAKCG IKMSLDDWKP
401: AQTFYYDFID LSENEITGSP ARFLNQTEYL VEFKAAGNKL RFDMGKLTFA KTLTTLDISR NLVFGKVPAM VAGLKTLNVS HNHLCGKLPV TKFPASAFVG
501: NDCLCGSPLS PCKA
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.