CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	98.12	98.12
CDY52664	Canola	extracellular	89.52	89.28
CDY50534	Canola	extracellular, vacuole	88.44	88.2
AT3G12610.1	Thale cress	extracellular	88.17	88.17
Solyc01g086920.2.1	Tomato	nucleus	30.11	68.29
VIT_13s0064g01260.t01	Wine grape	extracellular	60.22	62.92
KRH43480	Soybean	nucleus	60.22	62.57
GSMUA_Achr4P01520_001	Banana	cytosol	45.43	61.45
KRH20845	Soybean	endoplasmic reticulum	59.95	60.93
GSMUA_Achr10P...	Banana	cytosol	44.09	59.64
PGSC0003DMT400017733	Potato	extracellular	58.87	59.51
KRH27500	Soybean	endoplasmic reticulum, extracellular	58.33	59.45
CDY27559	Canola	extracellular	57.8	58.9
CDY60388	Canola	extracellular	57.8	58.9
CDY19601	Canola	extracellular	57.26	58.36
CDY06385	Canola	extracellular	56.99	58.08
Os08t0505900-01	Rice	extracellular	56.99	55.79
CDY69775	Canola	extracellular, plasma membrane	55.65	54.91
CDY68308	Canola	extracellular	54.84	54.55
CDX85681	Canola	extracellular	50.27	54.2
CDX91155	Canola	extracellular	50.27	54.05
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	54.03	54.03
Zm00001d031434_P001	Maize	extracellular	54.57	53.28
CDY53975	Canola	extracellular	53.23	53.08
KRH12883	Soybean	cytosol	22.58	52.83
CDY69275	Canola	extracellular	52.96	52.67
EES14271	Sorghum	cytosol	56.45	52.37
TraesCS7B01G146800.1	Wheat	extracellular	53.49	52.37
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.69	51.58
TraesCS7D01G243300.1	Wheat	extracellular	52.69	51.58
HORVU7Hr1G050110.1	Barley	vacuole	52.96	50.77
HORVU7Hr1G050140.1	Barley	plastid	52.96	50.51
KRG91824	Soybean	extracellular	31.99	49.58
CDY08451	Canola	endoplasmic reticulum, extracellular	29.57	33.74
CDY42127	Canola	extracellular	29.57	33.74
CDY05006	Canola	extracellular	28.76	33.02
CDY52623	Canola	extracellular, vacuole	28.49	32.62
CDY08448	Canola	extracellular	28.23	32.11
CDY14065	Canola	extracellular	27.96	32.1
CDY58884	Canola	extracellular	28.49	32.02
CDY42131	Canola	extracellular	27.69	31.89
CDY42130	Canola	extracellular	27.96	31.8
CDY50569	Canola	extracellular, vacuole	27.69	31.69
CDX98965	Canola	extracellular	28.23	31.63
CDY08450	Canola	extracellular	27.42	31.58
CDX70057	Canola	extracellular	28.49	31.55
CDX70060	Canola	extracellular	27.96	31.33
CDY58888	Canola	extracellular	28.76	31.29
CDY58887	Canola	extracellular	27.42	30.91
CDY42129	Canola	cytosol	26.88	30.86
CDX70058	Canola	extracellular	27.69	30.84
CDX98967	Canola	extracellular	27.69	30.65
CDX98966	Canola	extracellular	27.42	30.54
CDX70059	Canola	extracellular	27.42	30.54
CDX81023	Canola	extracellular	27.96	30.41
CDY58889	Canola	extracellular	27.15	29.11
CDX98968	Canola	endoplasmic reticulum, extracellular, vacuole	27.96	27.01
CDX70056	Canola	extracellular	27.42	25.19
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	10.48	23.93
CDY15279	Canola	plastid	27.15	23.71
CDX80361	Canola	extracellular, vacuole	37.37	23.68
CDY40923	Canola	extracellular, vacuole	29.84	23.67
CDX88024	Canola	extracellular, vacuole	37.1	23.51
CDY64876	Canola	extracellular, vacuole	36.83	23.5
CDY16850	Canola	plastid	29.57	22.22
CDY38783	Canola	extracellular	23.92	21.71
CDY11623	Canola	extracellular	23.39	20.81
CDX93758	Canola	plastid	13.44	19.46
CDX81022	Canola	extracellular, plasma membrane	23.66	17.39

Protein Annotations

EnsemblPlants:CDY00787	EnsemblPlantsGene:GSBRNA2T00110678001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44401
PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	ProteinID:CDY00787	ProteinID:CDY00787.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI0004EF2093	MapMan:35.1	:	:

Description

BnaC03g37710D

Coordinates

chrLK031921:-:1126608..1127906

Molecular Weight (calculated)

39478.4 Da

IEP (calculated)

4.829

GRAVY (calculated)

0.086

Length

372 amino acids

Sequence
(BLAST)

001: MTKLLPSPFS SLLAVVFISL ISIVHCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KGWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMTG
101: SIDPAVCDLT ALSSFVLADW KGISGEIPTC ITSLASLRVI DLAGNKITGE IPAEIGKLTK LVVLNLAENR MSGEIPPSLT SLAELKHLEL TENGISGEIP
201: ADFGSLKMLS RALLGRNELT GSIPGSISGM KRLADLDLSR NHIEGPIPEW MGNMKVLSVL NLDSNSLTGP IPGSILSNSG FGVLNLSRNA LEGSIPDVFG
301: STTYFMSLDL SHNNLSGRIP DSLSSAKFVG HLDISHNRLC GPIPVGSPFD HLEASSFSDN ECLCGGPLMK TC

Best Arabidopsis Sequence Match ( AT3G12610.1 )
(BLAST)

001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC

Arabidopsis Description

DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.