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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038737.1-P Field mustard endoplasmic reticulum, extracellular 99.2 99.2
CDY52664 Canola extracellular 97.86 97.86
CDY00787 Canola endoplasmic reticulum, extracellular, vacuole 88.2 88.44
CDX73812 Canola endoplasmic reticulum, extracellular, vacuole 87.4 87.63
AT3G12610.1 Thale cress extracellular 87.13 87.37
Solyc01g086920.2.1 Tomato nucleus 28.69 65.24
GSMUA_Achr4P01520_001 Banana cytosol 46.65 63.27
VIT_13s0064g01260.t01 Wine grape extracellular 60.05 62.92
KRH43480 Soybean nucleus 60.05 62.57
GSMUA_Achr10P... Banana cytosol 45.84 62.18
KRH20845 Soybean endoplasmic reticulum 60.32 61.48
KRH27500 Soybean endoplasmic reticulum, extracellular 58.98 60.27
PGSC0003DMT400017733 Potato extracellular 58.45 59.24
CDY27559 Canola extracellular 56.84 58.08
CDY60388 Canola extracellular 56.84 58.08
CDY19601 Canola extracellular 56.57 57.81
CDY06385 Canola extracellular 56.3 57.53
Os08t0505900-01 Rice extracellular 57.37 56.32
GSMUA_Achr3P03820_001 Banana endoplasmic reticulum, extracellular 56.03 56.18
KRH12883 Soybean cytosol 23.32 54.72
CDY68308 Canola extracellular 53.89 53.74
CDY69775 Canola extracellular, plasma membrane 54.16 53.58
CDX85681 Canola extracellular 49.33 53.33
Zm00001d031434_P001 Maize extracellular 54.42 53.28
CDX91155 Canola extracellular 49.06 52.89
TraesCS7B01G146800.1 Wheat extracellular 53.62 52.63
EES14271 Sorghum cytosol 56.3 52.37
CDY53975 Canola extracellular 52.01 52.01
TraesCS7D01G243300.1 Wheat extracellular 52.81 51.84
TraesCS7A01G244600.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.81 51.84
CDY69275 Canola extracellular 51.74 51.6
HORVU7Hr1G050110.1 Barley vacuole 53.35 51.29
HORVU7Hr1G050140.1 Barley plastid 53.35 51.03
KRG91824 Soybean extracellular 32.44 50.42
CDY08451 Canola endoplasmic reticulum, extracellular 28.95 33.13
CDY42127 Canola extracellular 28.69 32.82
CDX70057 Canola extracellular 29.22 32.44
CDY05006 Canola extracellular 28.15 32.41
CDY52623 Canola extracellular, vacuole 28.15 32.31
CDX98965 Canola extracellular 28.42 31.93
CDY14065 Canola extracellular 27.61 31.79
CDX70058 Canola extracellular 28.42 31.74
CDY58884 Canola extracellular 28.15 31.72
CDY50569 Canola extracellular, vacuole 27.61 31.69
CDX70060 Canola extracellular 28.15 31.63
CDX98967 Canola extracellular 28.42 31.55
CDX70059 Canola extracellular 28.15 31.44
CDX98966 Canola extracellular 28.15 31.44
CDY58888 Canola extracellular 28.69 31.29
CDY42131 Canola extracellular 27.08 31.27
CDY58887 Canola extracellular 27.61 31.21
CDY42130 Canola extracellular 27.08 30.89
CDY08448 Canola extracellular 26.81 30.58
CDX81023 Canola extracellular 27.88 30.41
CDY08450 Canola extracellular 26.27 30.34
CDY58889 Canola extracellular 27.08 29.11
CDY42129 Canola cytosol 25.2 29.01
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 28.15 27.27
CDX70056 Canola extracellular 27.35 25.19
CDX93759 Canola endoplasmic reticulum, extracellular, vacuole 10.72 24.54
CDY15279 Canola plastid 27.61 24.18
CDY40923 Canola extracellular, vacuole 30.29 24.09
CDY64876 Canola extracellular, vacuole 37.27 23.84
CDX88024 Canola extracellular, vacuole 37.0 23.51
CDX80361 Canola extracellular, vacuole 36.73 23.34
CDY38783 Canola extracellular 24.66 22.44
CDY16850 Canola plastid 29.49 22.22
CDY11623 Canola extracellular 24.13 21.53
CDX93758 Canola plastid 13.14 19.07
CDX81022 Canola extracellular, plasma membrane 24.4 17.98
Protein Annotations
EnsemblPlants:CDY50534EnsemblPlantsGene:GSBRNA2T00096958001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44401
PFAM:PF08263PFAM:PF13516ProteinID:CDY50534ProteinID:CDY50534.1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF52058UniParc:UPI0004EEADCCUniProt:A0A078IMD9MapMan:35.1::
Description
BnaA01g30460DBnaA01g30460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMD9]
Coordinates
chrLK032921:-:47967..49088
Molecular Weight (calculated)
39373.2 Da
IEP (calculated)
4.595
GRAVY (calculated)
0.105
Length
373 amino acids
Sequence
(BLAST)
001: MTKLLASPLS SLLLAVAFIS VITVVRSCSP TDQTALNAFK SSLSEPNLGI FNTWSENTDC CKGWYGISCD PDTGRVTDIS LRGESEDAIF QKAGRSGYMS
101: GSIDPAVCGL TALTSFVLAD WKGISGEIPP CVTSLASLRI LDLAGNRITG EIPTDIGKLT KLGVLNLAEN RMSGEIPSSL TLLSELKHLE LTENGISGEI
201: PADFGSLKML SRALLGRNEL TGSLPESMSG MDRLADLDLS RNHIEGPIPE WVGNMKVLSL LNLDCNSLTG TIPGSLLSNS GYGVLNLSRN ALEGSIPDVF
301: GSTTYFVALD LSHNNLAGRI PDSLSSAKFV GHLDISNNKL CGPIPTGSPF DHLEATSFSA NECLCGGPLM KAC
Best Arabidopsis Sequence Match ( AT3G12610.1 )
(BLAST)
001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC
Arabidopsis Description
DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.