Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53975 | Canola | extracellular | 94.92 | 95.17 |
| CDY68308 | Canola | extracellular | 89.04 | 89.04 |
| CDY69775 | Canola | extracellular, plasma membrane | 89.04 | 88.33 |
| CDX91155 | Canola | extracellular | 72.73 | 78.61 |
| AT5G12940.1 | Thale cress | extracellular | 77.01 | 77.63 |
| CDX85681 | Canola | extracellular | 71.12 | 77.1 |
| CDY19601 | Canola | extracellular | 62.03 | 63.56 |
| CDY06385 | Canola | extracellular | 61.5 | 63.01 |
| CDY60388 | Canola | extracellular | 61.23 | 62.74 |
| CDY27559 | Canola | extracellular | 60.96 | 62.47 |
| VIT_06s0004g01750.t01 | Wine grape | extracellular | 59.89 | 61.54 |
| KRH23157 | Soybean | nucleus | 59.63 | 60.6 |
| PGSC0003DMT400003166 | Potato | extracellular, vacuole | 56.42 | 57.97 |
| Solyc11g056680.1.1 | Tomato | extracellular | 56.15 | 57.69 |
| GSMUA_Achr10P... | Banana | cytosol | 40.91 | 55.64 |
| GSMUA_Achr4P01520_001 | Banana | cytosol | 40.64 | 55.27 |
| KRH24680 | Soybean | extracellular | 53.48 | 54.79 |
| CDX73812 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.48 | 53.76 |
| CDY00787 | Canola | endoplasmic reticulum, extracellular, vacuole | 52.67 | 52.96 |
| CDY52664 | Canola | extracellular | 51.87 | 52.01 |
| CDY50534 | Canola | extracellular, vacuole | 51.6 | 51.74 |
| GSMUA_Achr3P03820_001 | Banana | endoplasmic reticulum, extracellular | 51.34 | 51.61 |
| KRH29680 | Soybean | endoplasmic reticulum | 52.94 | 51.16 |
| Os08t0505900-01 | Rice | extracellular | 50.53 | 49.74 |
| TraesCS7D01G243300.1 | Wheat | extracellular | 50.27 | 49.47 |
| TraesCS7B01G146800.1 | Wheat | extracellular | 50.27 | 49.47 |
| TraesCS7A01G244600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 50.0 | 49.21 |
| KRH24681 | Soybean | extracellular | 46.26 | 48.73 |
| HORVU7Hr1G050110.1 | Barley | vacuole | 49.73 | 47.94 |
| HORVU7Hr1G050140.1 | Barley | plastid | 49.73 | 47.69 |
| Zm00001d031434_P001 | Maize | extracellular | 47.86 | 46.98 |
| EES14271 | Sorghum | cytosol | 48.93 | 45.64 |
| CDY08451 | Canola | endoplasmic reticulum, extracellular | 28.34 | 32.52 |
| CDY42127 | Canola | extracellular | 27.81 | 31.9 |
| CDY08448 | Canola | extracellular | 26.74 | 30.58 |
| CDX70057 | Canola | extracellular | 27.27 | 30.36 |
| CDY42131 | Canola | extracellular | 26.2 | 30.34 |
| CDX70059 | Canola | extracellular | 27.01 | 30.24 |
| CDY42130 | Canola | extracellular | 26.2 | 29.97 |
| CDX98966 | Canola | extracellular | 26.74 | 29.94 |
| CDY58884 | Canola | extracellular | 26.47 | 29.91 |
| CDX98967 | Canola | extracellular | 26.74 | 29.76 |
| CDY42129 | Canola | cytosol | 25.4 | 29.32 |
| CDY14065 | Canola | extracellular | 25.4 | 29.32 |
| CDY08450 | Canola | extracellular | 25.13 | 29.1 |
| CDY05006 | Canola | extracellular | 25.13 | 29.01 |
| CDY58888 | Canola | extracellular | 26.47 | 28.95 |
| CDY52623 | Canola | extracellular, vacuole | 25.13 | 28.92 |
| CDY58887 | Canola | extracellular | 25.4 | 28.79 |
| CDX70058 | Canola | extracellular | 25.67 | 28.74 |
| CDX70060 | Canola | extracellular | 25.4 | 28.61 |
| CDX98965 | Canola | extracellular | 25.4 | 28.61 |
| CDY50569 | Canola | extracellular, vacuole | 24.6 | 28.31 |
| CDX81023 | Canola | extracellular | 25.13 | 27.49 |
| CDY58889 | Canola | extracellular | 25.13 | 27.09 |
| CDX93759 | Canola | endoplasmic reticulum, extracellular, vacuole | 11.76 | 26.99 |
| CDY15279 | Canola | plastid | 29.14 | 25.59 |
| CDY40923 | Canola | extracellular, vacuole | 30.75 | 24.52 |
| CDX98968 | Canola | endoplasmic reticulum, extracellular, vacuole | 24.33 | 23.64 |
| CDX88024 | Canola | extracellular, vacuole | 36.1 | 23.0 |
| CDX80361 | Canola | extracellular, vacuole | 35.83 | 22.83 |
| CDY64876 | Canola | extracellular, vacuole | 35.56 | 22.81 |
| CDX70056 | Canola | extracellular | 24.06 | 22.22 |
| CDY38783 | Canola | extracellular | 24.06 | 21.95 |
| CDY11623 | Canola | extracellular | 24.33 | 21.77 |
| CDY16850 | Canola | plastid | 28.61 | 21.62 |
| CDX93758 | Canola | plastid | 14.44 | 21.01 |
| CDX81022 | Canola | extracellular, plasma membrane | 21.66 | 16.01 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078JSA3 | EnsemblPlants:CDY69275 | ProteinID:CDY69275 | ProteinID:CDY69275.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00086135001 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PFAM:PF08263 | PFAM:PF13855 | PFscan:PS51257 |
| PANTHER:PTHR44401 | PANTHER:PTHR44401:SF2 | SUPFAM:SSF52058 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EEF661 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng62760DBnaCnng62760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSA3]
Coordinates
chrLK039006:+:2022..3146
Molecular Weight (calculated)
40155.4 Da
IEP (calculated)
10.380
GRAVY (calculated)
0.136
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDAKNALVI VLTSVTVLLL AGAPTVVQAC LPSERAALLE FRSKLNEPFI GVFKTWKGQD CCNGWYGVSC DPKSRRVSGI TLRGVSEEPI FQRAKRKGFM
101: TGTISPALCK LTHLSGITIT DWEGISGVIP SCFTNLLAMR HLDLAGNKIS GDIPANIGKL MKLRVLNLAD NKISGVIPPS ITRLTSLSHL DLRNNYISGV
201: IPGDIGRLKM LSRVLLTGNR ISGQIPESLT RIYRLADLEL GMNRITGAIP TSLGKMSVLA TLDLHGNLIS GAIPGSLMTS SISNLNLRGN RLAGRIPNTF
301: GPRSYFTVLD LSNNRLQGAI PASITTASFI GHIDVSHNQL CGKIPTGSHF GHLEAASFAY NRCLCGKPLG NCRK
101: TGTISPALCK LTHLSGITIT DWEGISGVIP SCFTNLLAMR HLDLAGNKIS GDIPANIGKL MKLRVLNLAD NKISGVIPPS ITRLTSLSHL DLRNNYISGV
201: IPGDIGRLKM LSRVLLTGNR ISGQIPESLT RIYRLADLEL GMNRITGAIP TSLGKMSVLA TLDLHGNLIS GAIPGSLMTS SISNLNLRGN RLAGRIPNTF
301: GPRSYFTVLD LSNNRLQGAI PASITTASFI GHIDVSHNQL CGKIPTGSHF GHLEAASFAY NRCLCGKPLG NCRK
001: MDTKKSLVIL LTNVVVFLLL STTVHSCLPS DRAALLEFRA KLNEPYIGVF NTWKGLDCCK GWYGVSCDPN TRRVAGITLR GESEDPLFQK AKRSGLMTGS
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.