Factsheet for Bra028006.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93758	Canola	plastid	52.61	98.05
CDX93759	Canola	endoplasmic reticulum, extracellular, vacuole	32.99	96.93
CDY40923	Canola	extracellular, vacuole	94.36	96.38
CDY15279	Canola	plastid	83.92	94.37
AT1G33590.2	Thale cress	plastid	84.97	79.18
Bra010209.1-P	Field mustard	extracellular	70.56	70.71
Bra016239.1-P	Field mustard	cytosol	34.24	63.57
PGSC0003DMT400043544	Potato	extracellular	62.84	62.97
Solyc10g052880.1.1	Tomato	extracellular	61.38	61.51
KRH56366	Soybean	nucleus	62.0	60.74
VIT_18s0089g00010.t01	Wine grape	plasma membrane	66.18	33.19
Bra034773.1-P	Field mustard	cytosol	21.71	33.02
Bra023383.1-P	Field mustard	extracellular	23.8	32.85
Bra008870.1-P	Field mustard	extracellular	25.47	32.71
Bra008869.1-P	Field mustard	extracellular, plasma membrane	25.05	32.09
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	24.84	31.9
Bra034774.1-P	Field mustard	extracellular	21.71	31.9
Bra009234.1-P	Field mustard	extracellular	21.92	31.72
Bra038700.1-P	Field mustard	extracellular, vacuole	21.5	31.69
Bra009238.1-P	Field mustard	extracellular	21.71	31.33
Bra009237.1-P	Field mustard	extracellular	21.92	31.25
Bra035741.1-P	Field mustard	extracellular	23.8	31.23
Bra005918.1-P	Field mustard	extracellular	13.36	31.22
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	24.01	30.91
Bra009236.1-P	Field mustard	extracellular	21.5	30.84
Bra005919.1-P	Field mustard	extracellular	21.29	30.82
Bra005917.1-P	Field mustard	extracellular	21.71	30.41
Bra009235.1-P	Field mustard	extracellular	20.88	29.94
Bra005916.1-P	Field mustard	extracellular	21.09	29.11
Bra023925.1-P	Field mustard	extracellular	22.34	28.46
Bra026499.1-P	Field mustard	plastid	28.6	27.68
Bra009680.1-P	Field mustard	extracellular, vacuole	33.4	27.26

Protein Annotations

EnsemblPlants:Bra028006.1	EnsemblPlants:Bra028006.1-P	EnsemblPlantsGene:Bra028006	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45271	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI00025421F9	UniProt:M4EGU1	MapMan:35.1	:

Description

AT1G33590 (E=7e-235) | disease resistance protein-related / LRR protein-related

Coordinates

chrA09:-:19468732..19470171

Molecular Weight (calculated)

52170.6 Da

IEP (calculated)

9.896

GRAVY (calculated)

0.092

Length

479 amino acids

Sequence
(BLAST)

001: MNSSSSFSVF IFTAVIILRC LNPIKAATCH PDDEAGLLAF KSGITRDPSG ILSSWKKGTA CCSWNGITCL TGDRVTALTV SGQSEVAGSF LSGTISSSLA
101: KLQHLDGIYL MNLKNITGPF PQFLFRLPQL KYVYIENNRL SGPLPVNIGS LSQIEAFSLE GNRFTGPIPT SISNLTKLSQ LNLGGNLLTG TIPSGIANLK
201: LISFLNLGGN RLSGTIPDIF KSMPELRSLV LSRNGFSGNL PPSIASLAPI LRFLEVGRNK LSGKIPEYLS RFKALDTLDL SRNKFSGAVP KSFANLTKIF
301: NLDLSHNLLT DPFPALYVKG IESLDLSYNK FHLKTIPKWV TSSPIIFSLK LAKCGIKMSL DDWKPAEYYF YDFIDLSENE ISGSPARFLN LTEYLVEFRA
401: AGNKLRFDMG KLTFAKTLKT LDLSRNLVFG KVPATVAGLQ TLNVSQNHLC GKLPTTKFPA RAFTGNDCLC GPPLSPCKV

Best Arabidopsis Sequence Match ( AT1G33590.2 )
(BLAST)

001: MQMDWSKTST LTSQLSSNLF PTTNSSLLSI NTTQFTTMNS SFTLFIFTFV IFLQCLNPTG AATCHPDDEA GLLAFKAGIT RDPSGILSSW KKGTACCSWN
101: GVTCLTTDRV SALSVAGQAD VAGSFLSGTL SPSLAKLKHL DGIYFTDLKN ITGSFPQFLF QLPNLKYVYI ENNRLSGTLP ANIGALSQLE AFSLEGNRFT
201: GPIPSSISNL TLLTQLKLGN NLLTGTIPLG VANLKLMSYL NLGGNRLTGT IPDIFKSMPE LRSLTLSRNG FSGNLPPSIA SLAPILRFLE LGHNKLSGTI
301: PNFLSNFKAL DTLDLSKNRF SGVIPKSFAN LTKIFNLDLS HNLLTDPFPV LNVKGIESLD LSYNQFHLNT IPKWVTSSPI IFSLKLAKCG IKMSLDDWKP
401: AQTFYYDFID LSENEITGSP ARFLNQTEYL VEFKAAGNKL RFDMGKLTFA KTLTTLDISR NLVFGKVPAM VAGLKTLNVS HNHLCGKLPV TKFPASAFVG
501: NDCLCGSPLS PCKA

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G33590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.