Factsheet for Bra035741.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19601	Canola	extracellular	100.0	100.0
CDY06385	Canola	extracellular	98.9	98.9
AT3G20820.1	Thale cress	extracellular	93.15	93.15
Bra023925.1-P	Field mustard	extracellular	88.49	85.9
KRH23157	Soybean	nucleus	75.07	74.46
VIT_06s0004g01750.t01	Wine grape	extracellular	72.33	72.53
Solyc11g056680.1.1	Tomato	extracellular	67.95	68.13
PGSC0003DMT400003166	Potato	extracellular, vacuole	67.67	67.86
Bra023383.1-P	Field mustard	extracellular	60.82	63.98
Bra008869.1-P	Field mustard	extracellular, plasma membrane	64.66	63.1
Bra008870.1-P	Field mustard	extracellular	64.11	62.73
GSMUA_Achr10P...	Banana	cytosol	47.12	62.55
GSMUA_Achr4P01520_001	Banana	cytosol	46.85	62.18
KRH24680	Soybean	extracellular	59.73	59.73
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	59.18	58.06
Bra001460.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	58.08	56.99
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	57.53	56.3
KRH29680	Soybean	endoplasmic reticulum	59.45	56.07
KRH24681	Soybean	extracellular	54.25	55.77
Os08t0505900-01	Rice	extracellular	56.71	54.47
TraesCS7B01G146800.1	Wheat	extracellular	53.42	51.32
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.15	51.05
TraesCS7D01G243300.1	Wheat	extracellular	53.15	51.05
Zm00001d031434_P001	Maize	extracellular	53.15	50.92
HORVU7Hr1G050110.1	Barley	vacuole	53.7	50.52
HORVU7Hr1G050140.1	Barley	plastid	53.7	50.26
EES14271	Sorghum	cytosol	54.52	49.63
Bra005918.1-P	Field mustard	extracellular	19.18	34.15
Bra034774.1-P	Field mustard	extracellular	29.86	33.44
Bra005919.1-P	Field mustard	extracellular	29.32	32.33
Bra009237.1-P	Field mustard	extracellular	29.59	32.14
Bra038700.1-P	Field mustard	extracellular, vacuole	28.22	31.69
Bra005917.1-P	Field mustard	extracellular	29.59	31.58
Bra009236.1-P	Field mustard	extracellular	28.77	31.44
Bra009235.1-P	Field mustard	extracellular	28.77	31.44
Bra009234.1-P	Field mustard	extracellular	28.22	31.12
Bra034773.1-P	Field mustard	cytosol	26.3	30.48
Bra009238.1-P	Field mustard	extracellular	27.67	30.42
Bra005916.1-P	Field mustard	extracellular	27.95	29.39
Bra010209.1-P	Field mustard	extracellular	32.6	24.9
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	31.23	23.8
Bra009680.1-P	Field mustard	extracellular, vacuole	37.53	23.34
Bra026499.1-P	Field mustard	plastid	29.86	22.02
Bra016239.1-P	Field mustard	cytosol	14.25	20.16

Protein Annotations

EnsemblPlants:Bra035741.1	EnsemblPlants:Bra035741.1-P	EnsemblPlantsGene:Bra035741	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44401	PANTHER:PTHR44401:SF2	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	UniParc:UPI00025479FB	UniProt:M4F3U1	MapMan:35.1	:	:

Description

AT3G20820 (E=2e-189) | leucine-rich repeat family protein

Coordinates

chrA05:-:16859293..16860390

Molecular Weight (calculated)

39850.5 Da

IEP (calculated)

8.621

GRAVY (calculated)

0.062

Length

365 amino acids

Sequence
(BLAST)

001: MKLNVFVSLL LLLVSTATCC PPSDRRALLA FRAALHEPYL GIFNSWTGQD CCHNWYGVSC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISPAICD
101: LARLSAITIA DWKGISGEIP TCITRLPFLR TLDLIGNQIS GGIPNDIGRL HRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPPDFGRLTM
201: LSRALLSGNR ITGRIPESLT RIYRLADVDL SGNQLYGPIP ASLGRMAVLA TLNLDGNKFS GEIPQTLMTS SVMNLNLSRN MLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF SHLEAASFMY NDCLCGKPLR ACLKN

Best Arabidopsis Sequence Match ( AT3G20820.1 )
(BLAST)

001: MNLNVVVLLL LLLISSATCC PPSDRRALLA FRSALHEPYL GIFNSWTGQD CCHNWYGISC DSLTHRVADI NLRGESEDPI FERAHRTGYM TGHISASICE
101: LTRLSAITIA DWKGISGEIP KCITRLPFLR TLDLIGNQIS GGIPYDIGRL NRLAVLNVAD NRISGSIPKS LTNLSSLMHL DLRNNLISGV IPSDVGRLKM
201: LSRALLSGNR ITGRIPESLT NIYRLADVDL SGNQLYGTIP PSLGRMSVLA TLNLDGNKIS GEIPQTLMTS SVMNLNLSRN LLQGKIPEGF GPRSYFTVLD
301: LSYNNLKGPI PRSISGASFI GHLDLSHNHL CGRIPVGSPF DHLEAASFMF NDCLCGKPLR ACLKN

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.