Factsheet for Bra001460.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73812	Canola	endoplasmic reticulum, extracellular, vacuole	98.92	98.92
Bra038737.1-P	Field mustard	endoplasmic reticulum, extracellular	87.9	87.67
AT3G12610.1	Thale cress	extracellular	87.63	87.63
Solyc01g086920.2.1	Tomato	nucleus	30.11	68.29
VIT_13s0064g01260.t01	Wine grape	extracellular	60.48	63.2
GSMUA_Achr4P01520_001	Banana	cytosol	45.97	62.18
KRH43480	Soybean	nucleus	59.68	62.01
KRH20845	Soybean	endoplasmic reticulum	59.68	60.66
GSMUA_Achr10P...	Banana	cytosol	44.09	59.64
PGSC0003DMT400017733	Potato	extracellular	58.87	59.51
KRH27500	Soybean	endoplasmic reticulum, extracellular	58.06	59.18
Bra035741.1-P	Field mustard	extracellular	56.99	58.08
Bra008869.1-P	Field mustard	extracellular, plasma membrane	55.91	55.62
Os08t0505900-01	Rice	extracellular	56.45	55.26
Bra023925.1-P	Field mustard	extracellular	55.65	55.05
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	54.03	54.03
Bra008870.1-P	Field mustard	extracellular	53.76	53.62
Bra023383.1-P	Field mustard	extracellular	50.0	53.6
Zm00001d031434_P001	Maize	extracellular	54.57	53.28
KRH12883	Soybean	cytosol	22.58	52.83
EES14271	Sorghum	cytosol	56.45	52.37
TraesCS7B01G146800.1	Wheat	extracellular	53.49	52.37
TraesCS7A01G244600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.69	51.58
TraesCS7D01G243300.1	Wheat	extracellular	52.69	51.58
HORVU7Hr1G050110.1	Barley	vacuole	52.96	50.77
HORVU7Hr1G050140.1	Barley	plastid	52.96	50.51
KRG91824	Soybean	extracellular	31.99	49.58
Bra034774.1-P	Field mustard	extracellular	29.84	34.05
Bra005918.1-P	Field mustard	extracellular	18.28	33.17
Bra034773.1-P	Field mustard	cytosol	26.88	31.75
Bra009234.1-P	Field mustard	extracellular	28.23	31.72
Bra005919.1-P	Field mustard	extracellular	28.23	31.72
Bra038700.1-P	Field mustard	extracellular, vacuole	27.69	31.69
Bra005917.1-P	Field mustard	extracellular	28.76	31.29
Bra009237.1-P	Field mustard	extracellular	27.96	30.95
Bra009235.1-P	Field mustard	extracellular	27.69	30.84
Bra009238.1-P	Field mustard	extracellular	27.42	30.72
Bra009236.1-P	Field mustard	extracellular	27.15	30.24
Bra005916.1-P	Field mustard	extracellular	27.42	29.39
Bra028006.1-P	Field mustard	endoplasmic reticulum, vacuole	30.91	24.01
Bra010209.1-P	Field mustard	extracellular	30.38	23.64
Bra009680.1-P	Field mustard	extracellular, vacuole	36.56	23.17
Bra026499.1-P	Field mustard	plastid	29.3	22.02
Bra016239.1-P	Field mustard	cytosol	13.98	20.16

Protein Annotations

EnsemblPlants:Bra001460.1	EnsemblPlants:Bra001460.1-P	EnsemblPlantsGene:Bra001460	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PANTHER:PTHR44401	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	UniParc:UPI0002540800	UniProt:M4CB80	MapMan:35.1	:	:

Description

AT3G12610 (E=7e-184) DRT100 | DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100); nucleotide binding / protein binding

Coordinates

chrA03:-:16470619..16471737

Molecular Weight (calculated)

39452.4 Da

IEP (calculated)

4.829

GRAVY (calculated)

0.080

Length

372 amino acids

Sequence
(BLAST)

001: MTKLLPSPFS SLLAVVFISL ISIVHCCSPK DQTALNAFKS SLNEPNLGIF NTWSENTDCC KGWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMTG
101: SIDPAVCDLT ALSSFVLADW KGISGEIPTC ITSLASLRVI DLAGNKITGE IPAEIGKLTK LAVLNLAENR MSGEIPPSLT SLAELKHLEL TENGISGEIP
201: ADFGSLKMLS RALLGRNELA GSIPGSISGM KRLADLDLSR NHIEGPIPEW MGSMKVLSVL NLDSNSLTGP IPGSILSNSG FGVLNLSRNA LEGSIPDVFG
301: STTYFMSLDL SHNNLSGRIP DSLSSAKFVG HLDISHNRLC GPIPMGSPFD HLEASSFSDN ECLCGGPLMK TC

Best Arabidopsis Sequence Match ( AT3G12610.1 )
(BLAST)

001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC

Arabidopsis Description

DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.